RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PDCL3Q9H2J4 239 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 GOLGA2P5Q9HBQ8 144 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 RNF19AQ9NV58 838 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 SLC38A7Q9NVC3 462 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 PCDHGC5Q9Y5F6 944 aa12.18□□□□□ -0.46
SMAD4-205ENST00000588745 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 ATP1A1P05023 1023 aaKnown RBP12.17□□□□□ -0.46
SMAD4-205ENST00000588745 UNGP13051 313 aaPredicted RBP12.17□□□□□ -0.46
SMAD4-205ENST00000588745 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
SMAD4-205ENST00000588745 TAF6P49848 677 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
SMAD4-205ENST00000588745 CDH8P55286 799 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 NOMO3P69849 1222 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 CENPCQ03188 943 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 SV2CQ496J9 727 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 ZNF394Q53GI3 561 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 ACAD10Q6JQN1 1059 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 PPP1R2P3Q6NXS1 205 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 RHOT2Q8IXI1 618 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 GSTCDQ8NEC7 633 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 ZNF606Q8WXB4 792 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 ARMC5Q96C12 935 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 TWNKQ96RR1 684 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 GAD1Q99259 594 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 THAP2Q9H0W7 228 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 RSAD1Q9HA92 442 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 RGS18Q9NS28 235 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 PUF60Q9UHX1 559 aaKnown RBP12.17□□□□□ -0.46
SMAD4-205ENST00000588745 BARX2Q9UMQ3 279 aaPredicted RBP12.17□□□□□ -0.46
SMAD4-205ENST00000588745 SNX9Q9Y5X1 595 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 MRFAP1Q9Y605 127 aa12.17□□□□□ -0.46
SMAD4-205ENST00000588745 FAM170AA1A519 330 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 GRID2IPA4D2P6 1211 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ARL5CA6NH57 179 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ENC1O14682 589 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 PQBP1O60828 265 aaKnown RBP12.16□□□□□ -0.46
SMAD4-205ENST00000588745 PALMO75781 387 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 THP07101 528 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 NOP2P46087 812 aaKnown RBP12.16□□□□□ -0.46
SMAD4-205ENST00000588745 NSFP46459 744 aaKnown RBP12.16□□□□□ -0.46
SMAD4-205ENST00000588745 SCNN1GP51170 649 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 TERF1P54274 439 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 RAD23BP54727 409 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 GPC5P78333 572 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 AMPD2Q01433 879 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 TCEAL1Q15170 157 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ANKRD33Q7Z3H0 272 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ZNF598Q86UK7 904 aaKnown RBP12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ECHDC2Q86YB7 292 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 SLC4A11Q8NBS3 891 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 MYRIPQ8NFW9 859 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 LINC01599Q8WXQ3 324 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ZNF653Q96CK0 615 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 MMS19Q96T76 1030 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ZSWIM1Q9BR11 485 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 FTHL17Q9BXU8 183 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 ELOVL4Q9GZR5 314 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 GDAP2Q9NXN4 497 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 GTF3C4Q9UKN8 822 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 PCDHGC3Q9UN70 934 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 JRKLQ9Y4A0 524 aa12.16□□□□□ -0.46
SMAD4-205ENST00000588745 BRCA2P51587 3418 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 C9IYK1 514 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 SPTLC1O15269 473 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 INPPL1O15357 1258 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 MED7O43513 233 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 LSM8O95777 96 aaKnown RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TFRCP02786 760 aaKnown RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 CFHP08603 1231 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 CD19P15391 556 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 NDST1P52848 882 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 HADHBP55084 474 aaKnown RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 GRIK3Q13003 919 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TUBB2AQ13885 445 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 PKN2Q16513 984 aaKnown RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 NAA35Q5VZE5 725 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 PAPD7Q5XG87 772 aaKnown RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 SLC39A5Q6ZMH5 540 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 FAM43BQ6ZT52 329 aaPredicted RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 PASD1Q8IV76 773 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 LRRC57Q8N9N7 239 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TPCN2Q8NHX9 752 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 SLC35G2Q8TBE7 412 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TFAP2BQ92481 460 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 CYFIP2Q96F07 1278 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TMEM176AQ96HP8 235 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 CALR3Q96L12 384 aaKnown RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 MRPL45Q9BRJ2 306 aaKnown RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TUBB2BQ9BVA1 445 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
SMAD4-205ENST00000588745 OSGEPQ9NPF4 335 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 MIOSQ9NXC5 875 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 CDC23Q9UJX2 597 aa12.15□□□□□ -0.46
SMAD4-205ENST00000588745 TDRD15B5MCY1 1934 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms