RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 WDR5P61964 334 aaKnown RBP15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 MYO1EQ12965 1108 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 TUSC3Q13454 348 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 SOWAHAQ2M3V2 549 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 TDRD12Q587J7 1177 aaKnown RBP15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 TMEM270Q6UE05 265 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 ZSCAN30Q86W11 494 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 RBBP8NLQ8NC74 664 aaPredicted RBP15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 SLC30A5Q8TAD4 765 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 EPS8L1Q8TE68 723 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 FAM81BQ96LP2 452 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 ZSWIM1Q9BR11 485 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 ELOVL4Q9GZR5 314 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 NRDE2Q9H7Z3 1164 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 SNX9Q9Y5X1 595 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 ADGRG1Q9Y653 693 aa15.33■□□□□ 0.04
SMARCD2-211ENST00000584483 A0A087X0T9 212 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 HCRTO43612 131 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 CILPO75339 1184 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 CLSTN1O94985 981 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 LCA5LO95447 670 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 FAM228BP0C875 321 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 CYP11B1P15538 503 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 RPL9P32969 192 aaKnown RBP15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 KCNJ6P48051 423 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 AARSP49588 968 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 ORC1Q13415 861 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 OSTM1Q86WC4 334 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 DNAAF5Q86Y56 855 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 PALB2Q86YC2 1186 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 CCDC170Q8IYT3 715 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 RPUSD2Q8IZ73 545 aaKnown RBP15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 KBTBD7Q8WVZ9 684 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 TOP1MTQ969P6 601 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 PCDHB18PQ96TA0 734 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 CYP3A43Q9HB55 503 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 LRFN2Q9ULH4 789 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 L1RE1Q9UN81 338 aa15.32■□□□□ 0.04
SMARCD2-211ENST00000584483 EIF3CLB5ME19 914 aaKnown RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 I3L4J1 428 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 DGKIO75912 1065 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 ABL1P00519 1130 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 MMEP08473 750 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 PNPLA4P41247 253 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 BRCC3P46736 316 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 KIF11P52732 1056 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 RAD23BP54727 409 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 CYP27A1Q02318 531 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 GFPT1Q06210 699 aaPredicted RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 INCA1Q0VD86 236 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 SV2CQ496J9 727 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 PAN2Q504Q3 1202 aaKnown RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 TIGD5Q53EQ6 642 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 ZNF394Q53GI3 561 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 TMEM240Q5SV17 173 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 ZNF365Q70YC5 407 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 OTOP2Q7RTS6 562 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 REXO1L1PQ8IX06 675 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 SLC4A11Q8NBS3 891 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 URGCPQ8TCY9 931 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 TFAP2BQ92481 460 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 SENP8Q96LD8 212 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 CCDC42Q96M95 316 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 ZNF560Q96MR9 790 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 MMS19Q96T76 1030 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 EIF3CQ99613 913 aaKnown RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 AGPAT1Q99943 283 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 LPIN3Q9BQK8 851 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 KANSL3Q9P2N6 904 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 ADAMTS1Q9UHI8 967 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 ZMYND8Q9ULU4 1186 aaPredicted RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 TFR2Q9UP52 801 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 R3HCC1Q9Y3T6 440 aaKnown RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 BZW2Q9Y6E2 419 aaKnown RBP15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 TSC2P49815 1807 aa15.31■□□□□ 0.04
SMARCD2-211ENST00000584483 RCCD1A6NED2 376 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 TBKBP1A7MCY6 615 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 KIF4AO95239 1232 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 PFKMP08237 780 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 LMO2P25791 158 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 SSTR3P32745 418 aaPredicted RBP15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 NDST1P52848 882 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 TNNC1P63316 161 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 FMO1Q01740 532 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 FPGSQ05932 587 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 TAF3Q5VWG9 929 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 DCLRE1AQ6PJP8 1040 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 HASPINQ8TF76 798 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 DDX27Q96GQ7 796 aaKnown RBP15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 UROC1Q96N76 676 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.3■□□□□ 0.041e-8■■■■■ 32.7
SMARCD2-211ENST00000584483 RC3H2Q9HBD1 1191 aaKnown RBP15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 KCND1Q9NSA2 647 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 BARX2Q9UMQ3 279 aaPredicted RBP15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 PPP2R2CQ9Y2T4 447 aa15.3■□□□□ 0.04
SMARCD2-211ENST00000584483 FAM170AA1A519 330 aa15.29■□□□□ 0.04
SMARCD2-211ENST00000584483 CCDC85CA6NKD9 419 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms