RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 RTL10Q7L3V2 364 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 TCEAL8Q8IYN2 117 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 UBALD2Q8IYN6 164 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 RSAD2Q8WXG1 361 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 ZNF560Q96MR9 790 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 OXCT2Q9BYC2 517 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-219ENST00000580540 HCN4Q9Y3Q4 1203 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 R3HCC1Q9Y3T6 440 aaKnown RBP17.95■□□□□ 0.46
SREBF1-219ENST00000580540 INSL5Q9Y5Q6 135 aa17.95■□□□□ 0.46
SREBF1-219ENST00000580540 SCN1AP35498 2009 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 KPNA7A9QM74 516 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 LAMP2P13473 410 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 PTPN2P17706 415 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 CDR1P51861 262 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 BFSP1Q12934 665 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 STK4Q13043 487 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 TDGQ13569 410 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 SURF1Q15526 300 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 WSCD1Q658N2 575 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 THEM5Q8N1Q8 247 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 ELMOD1Q8N336 334 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 C1orf127Q8N9H9 656 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 ITFG1Q8TB96 612 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 CCDC47Q96A33 483 aaKnown RBP17.94■□□□□ 0.46
SREBF1-219ENST00000580540 ANKRD36BP1Q96IX9 119 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 MFSD14AQ96MC6 490 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 TMEM209Q96SK2 561 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 CORO1BQ9BR76 489 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 MTMR12Q9C0I1 747 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 GOLPH3LQ9H4A5 285 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 KIAA1586Q9HCI6 787 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 IGSF9Q9P2J2 1179 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 EPS15L1Q9UBC2 864 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 DSEQ9UL01 958 aa17.94■□□□□ 0.46
SREBF1-219ENST00000580540 MRPS23Q9Y3D9 190 aaKnown RBP17.94■□□□□ 0.46
SREBF1-219ENST00000580540 TNNC2P02585 160 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 POU2F2P09086 479 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 DLATP10515 647 aaKnown RBP17.93■□□□□ 0.46
SREBF1-219ENST00000580540 PNPLA4P41247 253 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 RBP5P82980 135 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 TWF1Q12792 350 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 PSMD2Q13200 908 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 SNRNP35Q16560 246 aaKnown RBP17.93■□□□□ 0.46
SREBF1-219ENST00000580540 KNOP1Q1ED39 458 aaKnown RBP17.93■□□□□ 0.46
SREBF1-219ENST00000580540 XXYLT1Q8NBI6 393 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 ING5Q8WYH8 240 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 CCDC127Q96BQ5 260 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 INTS13Q9NVM9 706 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 CDH7Q9ULB5 785 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 SLC27A5Q9Y2P5 690 aa17.93■□□□□ 0.46
SREBF1-219ENST00000580540 FAM237AA0A1B0GTK4 181 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 ZNF202O95125 648 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 RPN1P04843 607 aaKnown RBP17.92■□□□□ 0.46
SREBF1-219ENST00000580540 RHOP08100 348 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 TNNI1P19237 187 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 SNRPFP62306 86 aaKnown RBP17.92■□□□□ 0.46
SREBF1-219ENST00000580540 DUSP4Q13115 394 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 GPR17Q13304 367 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 MYBPC2Q14324 1141 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 DUOXA2Q1HG44 320 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 BMT2Q1RMZ1 405 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 SCARA3Q6AZY7 606 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 IQCEQ6IPM2 695 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 KRBA2Q6ZNG9 492 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 SUGP1Q8IWZ8 645 aaKnown RBP17.92■□□□□ 0.46
SREBF1-219ENST00000580540 ATAD1Q8NBU5 361 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 KIAA0895Q8NCT3 520 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 OR5B17Q8NGF7 314 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 FGF13Q92913 245 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 ASIC4Q96FT7 647 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 BORCS6Q96GS4 357 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 ZNF512Q96ME7 567 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-219ENST00000580540 FNBP1Q96RU3 617 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 ITGA11Q9UKX5 1188 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 MAFFQ9ULX9 164 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 TRIOO75962 3097 aa17.92■□□□□ 0.46
SREBF1-219ENST00000580540 EXOC3O60645 756 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 HUS1O60921 280 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 CYP11A1P05108 521 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 MYL1P05976 194 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 SLC39A12Q504Y0 691 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 OR10T2Q8NGX3 314 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 MCRS1Q96EZ8 462 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 CGNQ9P2M7 1197 aaKnown RBP17.91■□□□□ 0.46
SREBF1-219ENST00000580540 SIX4Q9UIU6 781 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 FBXL21Q9UKT6 434 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 SNX9Q9Y5X1 595 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 ZFP37Q9Y6Q3 630 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-219ENST00000580540 PTPRJQ12913 1337 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 DOCK8Q8NF50 2099 aa17.91■□□□□ 0.46
SREBF1-219ENST00000580540 MTMR11A4FU01 709 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 NARSO43776 548 aaKnown RBP17.9■□□□□ 0.46
SREBF1-219ENST00000580540 VNN2O95498 520 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 PDGFBP01127 241 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-219ENST00000580540 MYL4P12829 197 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 ALDH1A3P47895 512 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 CYP24A1Q07973 514 aa17.9■□□□□ 0.46
SREBF1-219ENST00000580540 SLC5A9Q2M3M2 681 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms