RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PROSCO94903 275 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 UBOX5O94941 541 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 AGTP01019 485 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 UBA1P22314 1058 aaKnown RBP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 BPIFB4P59827 614 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 CAPSQ13938 189 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 SIX1Q15475 284 aaPredicted RBP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 ABRAQ8N0Z2 381 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 TMC2Q8TDI7 906 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 APOL6Q9BWW8 343 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 AAASQ9NRG9 546 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 CISHQ9NSE2 258 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 SIPA1L1O43166 1804 aa14.46□□□□□ -0.09
PRPF40B-209ENST00000548825 SYNJ2BP-COX16A0A087WUM0 186 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 STAM2O75886 525 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 TTC4O95801 387 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 CXCL8P10145 99 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 UNGP13051 313 aaPredicted RBP14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 MPP2Q14168 576 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 POTEAQ6S8J7 498 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 ABHD15Q6UXT9 468 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 KCTD17Q8N5Z5 321 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 SLCO1B3Q9NPD5 702 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 COX16Q9P0S2 106 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 DCTN4Q9UJW0 460 aa14.46□□□□□ -0.1
PRPF40B-209ENST00000548825 SPDYE16A6NNV3 312 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 PECAM1P16284 738 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 HMGB2P26583 209 aaKnown RBP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 MAGEA4P43358 317 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 BAG6P46379 1132 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 FNTAP49354 379 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 NOMO3P69849 1222 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 CNGA2Q16280 664 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 CYB5D1Q6P9G0 228 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 RFX6Q8HWS3 928 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 FEZF2Q8TBJ5 459 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 GRK7Q8WTQ7 553 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 PRCCQ92733 491 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 TLCD1Q96CP7 247 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 DDX27Q96GQ7 796 aaKnown RBP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 ADAM7Q9H2U9 754 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 MAGED2Q9UNF1 606 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 L3MBTL1Q9Y468 752 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 AFG3L2Q9Y4W6 797 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 CCT8L1PA6NM43 557 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 PSMC1P62191 440 aaKnown RBP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 GCNT1Q02742 428 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 EFTUD2Q15029 972 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 TAF5Q15542 800 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 AMHR2Q16671 573 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 BSPRYQ5W0U4 402 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 NIPA1Q7RTP0 329 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 CTAGE3PQ8IX95 158 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 RSAD2Q8WXG1 361 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 SENP7Q9BQF6 1050 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 TRAIPQ9BWF2 469 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 NRBP2Q9NSY0 501 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 GINM1Q9NU53 330 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 HEY1Q9Y5J3 304 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 COL4A5P29400 1685 aa14.45□□□□□ -0.1
PRPF40B-209ENST00000548825 CST8O60676 142 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 C4BPAP04003 597 aaKnown RBP14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 PRKCBP05771 671 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 ITIH2P19823 946 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 CDC25CP30307 473 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 SSTR1P30872 391 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 OVGP1Q12889 678 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 MAPK6Q16659 721 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 CRELD2Q6UXH1 353 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 VSIG1Q86XK7 387 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 CPB2Q96IY4 423 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 ARHGAP28Q9P2N2 729 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 FSCN2O14926 492 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 CD48P09326 243 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 NUDT17P0C025 328 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 GARTP22102 1010 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 RFC1P35251 1148 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 MMP13P45452 471 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 C12orf56Q8IXR9 622 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 C7orf31Q8N865 590 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 TFAP2BQ92481 460 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 KLHL29Q96CT2 875 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 CAMKK2Q96RR4 588 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 PITPNM3Q9BZ71 974 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 PARVAQ9NVD7 372 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 GPATCH2LQ9NWQ4 482 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 HOXC10Q9NYD6 342 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 AKT3Q9Y243 479 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 LYPLA2O95372 231 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 FDX1P10109 184 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 KCNJ2P63252 427 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 R3HDM1Q15032 1099 aaKnown RBP14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 SNCBQ16143 134 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 EEF1DP3Q658K8 133 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 C1orf228Q6PIY5 440 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 TRPM8Q7Z2W7 1104 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 SAMD3Q8N6K7 520 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 SEC14L1Q92503 715 aa14.44□□□□□ -0.1
PRPF40B-209ENST00000548825 CDHR1Q96JP9 859 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms