RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 RMND1Q9NWS8 449 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 HCFC1R1Q9NWW0 138 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 KCNG1Q9UIX4 513 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 CDH7Q9ULB5 785 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 POLIQ9UNA4 740 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 ZKSCAN5Q9Y2L8 839 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 PCDHB13Q9Y5F0 798 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 F5P12259 2224 aa10.19□□□□□ -0.78
VPS26B-207ENST00000532160 HNRNPDLO14979 420 aaKnown RBP10.18□□□□□ -0.78
VPS26B-207ENST00000532160 CLIC2O15247 247 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 HNRNPA1P09651 372 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS26B-207ENST00000532160 OR1D2P34982 312 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 PRCPP42785 496 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 MATR3P43243 847 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS26B-207ENST00000532160 ID4P47928 161 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 LIG4P49917 911 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 CLCN6P51797 869 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 GPC5P78333 572 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 SEZ6Q53EL9 994 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 ZNF658Q5TYW1 1059 aaPredicted RBP10.18□□□□□ -0.78
VPS26B-207ENST00000532160 KLHL10Q6JEL2 608 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 CD300LGQ6UXG3 332 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 RSPO2Q6UXX9 243 aaPredicted RBP10.18□□□□□ -0.78
VPS26B-207ENST00000532160 MAP4K3Q8IVH8 894 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 SYCP3Q8IZU3 236 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 CEP120Q8N960 986 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 PJA1Q8NG27 643 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 FGF13Q92913 245 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 PPP1R10Q96QC0 940 aaKnown RBP10.18□□□□□ -0.78
VPS26B-207ENST00000532160 ADPGKQ9BRR6 497 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 TCHPQ9BT92 498 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 MRPL4Q9BYD3 311 aaKnown RBP10.18□□□□□ -0.78
VPS26B-207ENST00000532160 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 GOLGA2P5Q9HBQ8 144 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 SIT1Q9Y3P8 196 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 PATJQ8NI35 1801 aa10.18□□□□□ -0.78
VPS26B-207ENST00000532160 CITO14578 2027 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 NCOR2Q9Y618 2525 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 SPTBN2O15020 2390 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 EIF3DO15371 548 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 TGFB1I1O43294 461 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 B3GAT3O94766 335 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 LMNAP02545 664 aaKnown RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 PTMAP06454 111 aaKnown RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 SP9P0CG40 484 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 PYGBP11216 843 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 TKTP29401 623 aaKnown RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 HOXA9P31269 272 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 CLCNKBP51801 687 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 STX17P56962 302 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 STARD6P59095 220 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 OSTNP61366 133 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 FOXK2Q01167 660 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 ELAVL2Q12926 359 aaKnown RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 RAB33AQ14088 237 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 DPCR1Q3MIW9 517 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 ZNF568Q3ZCX4 644 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 RBM43Q6ZSC3 357 aaKnown RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 STXBP4Q6ZWJ1 553 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 MTERF4Q7Z6M4 381 aaKnown RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 C1orf210Q8IVY1 113 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 MAML2Q8IZL2 1156 aaPredicted RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 C3orf58Q8NDZ4 430 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 ZSWIM2Q8NEG5 633 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 NOC3LQ8WTT2 800 aaKnown RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 ING5Q8WYH8 240 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 HVCN1Q96D96 273 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 KXD1Q9BQD3 176 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 CBWD1Q9BRT8 395 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 CDT1Q9H211 546 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 PCIF1Q9H4Z3 704 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 MTRRQ9UBK8 725 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 MTF2Q9Y483 593 aaPredicted RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 CDY1Q9Y6F8 540 aa10.17□□□□□ -0.78
VPS26B-207ENST00000532160 ZFP37Q9Y6Q3 630 aaPredicted RBP10.17□□□□□ -0.78
VPS26B-207ENST00000532160 GOLGA8IPA6NC78 632 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 TRIM49BA6NDI0 452 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 GOLGA8JA6NMD2 632 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 PPP1R3GB7ZBB8 358 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 TMEM189-UBE2V1I3L0A0 370 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 I3L4J1 428 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 ABLIM1O14639 778 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 XYLBO75191 536 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 PIGRP01833 764 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 FGFR3P22607 806 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 ADSSP30520 456 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 BRCC3P46736 316 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 PMS1P54277 932 aaKnown RBP10.16□□□□□ -0.78
VPS26B-207ENST00000532160 NLRP12P59046 1061 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 SOX4Q06945 474 aaPredicted RBP10.16□□□□□ -0.78
VPS26B-207ENST00000532160 ALCAMQ13740 583 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 MLF2Q15773 248 aaPredicted RBP10.16□□□□□ -0.78
VPS26B-207ENST00000532160 UPP1Q16831 310 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 KNOP1Q1ED39 458 aaKnown RBP10.16□□□□□ -0.78
VPS26B-207ENST00000532160 BMT2Q1RMZ1 405 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 SLC5A9Q2M3M2 681 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 DCAF4L1Q3SXM0 396 aa10.16□□□□□ -0.78
VPS26B-207ENST00000532160 PABPC1LQ4VXU2 614 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms