RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 LRPAP1P30533 357 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 GPC5P78333 572 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 PSMD2Q13200 908 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 KMT5BQ4FZB7 885 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 JADE1Q6IE81 842 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 ARMCX5Q6P1M9 558 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.67■□□□□ 0.9
PKP3-204ENST00000526971 CEP57Q86XR8 500 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 ZSWIM2Q8NEG5 633 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 PJA1Q8NG27 643 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 SAAL1Q96ER3 474 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 CDH7Q9ULB5 785 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 SIT1Q9Y3P8 196 aa20.67■□□□□ 0.9
PKP3-204ENST00000526971 KIAA0391O15091 583 aaKnown RBP20.66■□□□□ 0.9
PKP3-204ENST00000526971 EXTL3O43909 919 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 LMNAP02545 664 aaKnown RBP20.66■□□□□ 0.9
PKP3-204ENST00000526971 PRR29P0C7W0 189 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 SP9P0CG40 484 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 BRCC3P46736 316 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 STK4Q13043 487 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 BMT2Q1RMZ1 405 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 SPATA1Q5VX52 437 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 ERMP1Q7Z2K6 904 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 FMR1NBQ8N0W7 255 aaPredicted RBP20.66■□□□□ 0.9
PKP3-204ENST00000526971 ITFG1Q8TB96 612 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 PCIF1Q9H4Z3 704 aa20.66■□□□□ 0.9
PKP3-204ENST00000526971 GOLGA8IPA6NC78 632 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 GOLGA8JA6NMD2 632 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 I3L4J1 428 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 TGFB1I1O43294 461 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 IL18RAPO95256 599 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 RPN1P04843 607 aaKnown RBP20.65■□□□□ 0.9
PKP3-204ENST00000526971 NFICP08651 508 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 HNRNPA1P09651 372 aaKnown RBP eCLIP20.65■□□□□ 0.9
PKP3-204ENST00000526971 STARD6P59095 220 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 SNRPFP62306 86 aaKnown RBP20.65■□□□□ 0.9
PKP3-204ENST00000526971 DPYDQ12882 1025 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 TMEM132DQ14C87 1099 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 PPM1LQ5SGD2 360 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 LIN9Q5TKA1 542 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 PDXDC1Q6P996 788 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 NELFCDQ8IXH7 590 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 MAML2Q8IZL2 1156 aaPredicted RBP20.65■□□□□ 0.9
PKP3-204ENST00000526971 TMEM130Q8N3G9 435 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 ENGASEQ8NFI3 743 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 BEST2Q8NFU1 509 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 FGF13Q92913 245 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 AGPAT3Q9NRZ7 376 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 HCFC1R1Q9NWW0 138 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 C2CD2Q9Y426 696 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 NUB1Q9Y5A7 615 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 ZFP37Q9Y6Q3 630 aaPredicted RBP20.65■□□□□ 0.9
PKP3-204ENST00000526971 MYH11P35749 1972 aa20.65■□□□□ 0.9
PKP3-204ENST00000526971 GUCY2FP51841 1108 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 SNW1Q13573 536 aaKnown RBP20.64■□□□□ 0.89
PKP3-204ENST00000526971 RSPO2Q6UXX9 243 aaPredicted RBP20.64■□□□□ 0.89
PKP3-204ENST00000526971 C1orf210Q8IVY1 113 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 BRSK2Q8IWQ3 736 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 GPD1LQ8N335 351 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 KIAA0895Q8NCT3 520 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 SLC7A14Q8TBB6 771 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 CCDC47Q96A33 483 aaKnown RBP20.64■□□□□ 0.89
PKP3-204ENST00000526971 RMDN1Q96DB5 314 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 CCDC34Q96HJ3 373 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 SEMA4AQ9H3S1 761 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 RBAKQ9NYW8 714 aaPredicted RBP20.64■□□□□ 0.89
PKP3-204ENST00000526971 CITO14578 2027 aa20.64■□□□□ 0.89
PKP3-204ENST00000526971 PDCD11Q14690 1871 aaKnown RBP20.63■□□□□ 0.89
PKP3-204ENST00000526971 TKTP29401 623 aaKnown RBP20.63■□□□□ 0.89
PKP3-204ENST00000526971 HOXA9P31269 272 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 FAM160A1Q05DH4 1040 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 KNOP1Q1ED39 458 aaKnown RBP20.63■□□□□ 0.89
PKP3-204ENST00000526971 POTEHQ6S545 545 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 HS2ST1Q7LGA3 356 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 NT5DC4Q86YG4 428 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 KIAA2013Q8IYS2 634 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 SUSD3Q96L08 255 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 DDX23Q9BUQ8 820 aaKnown RBP20.63■□□□□ 0.89
PKP3-204ENST00000526971 HSPBP1Q9NZL4 362 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 POLIQ9UNA4 740 aa20.63■□□□□ 0.89
PKP3-204ENST00000526971 MTF2Q9Y483 593 aaPredicted RBP20.63■□□□□ 0.89
PKP3-204ENST00000526971 NCOR2Q9Y618 2525 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 SYN3O14994 580 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 RHOBTB3O94955 611 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 MCM4P33991 863 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 WNT7BP56706 349 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 RAB33AQ14088 237 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 NPAS3Q8IXF0 933 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 EFCAB13Q8IY85 973 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 NOC3LQ8WTT2 800 aaKnown RBP20.62■□□□□ 0.89
PKP3-204ENST00000526971 KXD1Q9BQD3 176 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 KIAA1586Q9HCI6 787 aa20.62■□□□□ 0.89
PKP3-204ENST00000526971 CGNQ9P2M7 1197 aaKnown RBP20.62■□□□□ 0.89
PKP3-204ENST00000526971 DNMT3BQ9UBC3 853 aaKnown RBP20.62■□□□□ 0.89
PKP3-204ENST00000526971 COL4A2P08572 1712 aa20.61■□□□□ 0.89
PKP3-204ENST00000526971 ZNF233A6NK53 670 aa20.61■□□□□ 0.89
PKP3-204ENST00000526971 CLIC2O15247 247 aa20.61■□□□□ 0.89
PKP3-204ENST00000526971 POU2F2P09086 479 aa20.61■□□□□ 0.89
PKP3-204ENST00000526971 OR1D2P34982 312 aa20.61■□□□□ 0.89
PKP3-204ENST00000526971 AARSP49588 968 aaKnown RBP eCLIP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms