RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 MTM1Q13496 603 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 TRADDQ15628 312 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 PPP4R1Q8TF05 950 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 TXLNGQ9NUQ3 528 aa11.89□□□□□ -0.51
PCDHGB4-201ENST00000519479 MAPK13O15264 365 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 OGTO15294 1046 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 TTMPQ5BVD1 217 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 C1orf228Q6PIY5 440 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 SIX6OS1Q8N1H7 587 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 TTC17Q96AE7 1141 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 BCAS3Q9H6U6 928 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 A1CFQ9NQ94 594 aaKnown RBP11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 NKRFO15226 690 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 TOM1L1O75674 476 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 KRT10P13645 584 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 TNFRSF8P28908 595 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 MAGEA4P43358 317 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 ROR1Q01973 937 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 GCNT1Q02742 428 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 PPATQ06203 517 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 KLHL38Q2WGJ6 581 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 MCOLN2Q8IZK6 566 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 TMEM161BQ8NDZ6 487 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 ACAP3Q96P50 834 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 KRT37O76014 449 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 PROSCO94903 275 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 PDGFRAP16234 1089 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 SAT1P21673 171 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 ARL1P40616 181 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 NLRP11P59045 1033 aaKnown RBP11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 UGCGQ16739 394 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 SYCP2LQ5T4T6 812 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 MBOAT7Q96N66 472 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 CGRRF1Q99675 332 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 WDR35Q9P2L0 1181 aa11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 TPX2Q9ULW0 747 aaKnown RBP11.88□□□□□ -0.51
PCDHGB4-201ENST00000519479 CST8O60676 142 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 PGK2P07205 417 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 RARAP10276 462 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 DNAAF3Q8N9W5 541 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 BEST2Q8NFU1 509 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 LENG9Q96B70 501 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 ZBTB45Q96K62 511 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 TRABDQ9H4I3 376 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 A0A0G2JND7 137 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 PSTPIP1O43586 416 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 CALCAP01258 141 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 RPL21P46778 160 aaKnown RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 RGS7P49802 495 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 PPM1NQ8N819 430 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 GPRC5AQ8NFJ5 357 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 PDGFDQ9GZP0 370 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 SPATS2LQ9NUQ6 558 aaKnown RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 NFKBIEO00221 500 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 HSD17B4P51659 736 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 SESN3P58005 492 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 ARMCX2Q7L311 632 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 HES6Q96HZ4 224 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 PCDHA3Q9Y5H8 950 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 SNX9Q9Y5X1 595 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 MYH3P11055 1940 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 A8MXQ7 604 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 PLA2G6O60733 806 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 GRAP2O75791 330 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 CLCN3P51790 818 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 MYL6P60660 151 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 IRX4P78413 519 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 RCN2Q14257 317 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 TMEM132DQ14C87 1099 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 FAM71AQ8IYT1 594 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 ABRAQ8N0Z2 381 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 SCFD2Q8WU76 684 aa11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 CDC42EP4Q9H3Q1 356 aaKnown RBP11.87□□□□□ -0.51
PCDHGB4-201ENST00000519479 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 HBP1O60381 514 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 PTPRAP18433 802 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 MARCKSL1P49006 195 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 RNASELQ05823 741 aaKnown RBP11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 SPIRE1Q08AE8 756 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 SDCCAG8Q86SQ7 713 aaPredicted RBP11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 TRIM42Q8IWZ5 723 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 C4orf33Q8N1A6 199 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 TTC39CQ8N584 583 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 FAM129AQ9BZQ8 928 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 DHX35Q9H5Z1 703 aaKnown RBP11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 FGFR1OP2Q9NVK5 253 aa11.86□□□□□ -0.51
PCDHGB4-201ENST00000519479 PCDHA2Q9Y5H9 948 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms