RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NPNTQ6UXI9 565 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 MAEAQ7L5Y9 396 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 SLC41A1Q8IVJ1 513 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 PAF1Q8N7H5 531 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 ANKRD42Q8N9B4 389 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 MYRIPQ8NFW9 859 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 TRIM63Q969Q1 353 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 CGRRF1Q99675 332 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 C7orf25Q9BPX7 421 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 NOL10Q9BSC4 688 aaKnown RBP5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 OR10A5Q9H207 317 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 PRDM12Q9H4Q4 367 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 PTPRHQ9HD43 1115 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 TRMT13Q9NUP7 481 aaKnown RBP5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 UCKL1Q9NWZ5 548 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 SERPINB13Q9UIV8 391 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 USP18Q9UMW8 372 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 NIP7Q9Y221 180 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 IPPQ9Y573 584 aa5.61□□□□□ -1.51
HMGB1P23-201ENST00000518743 CACNA1HO95180 2353 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 LAMB1P07942 1786 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 hCG_1642624A0A1W2PR95 340 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZC3H12DA2A288 527 aaKnown RBP5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZNF839A8K0R7 811 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 NOTOA8MTQ0 251 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 DDX3XO00571 662 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 DYRK3O43781 588 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 PSPNO60542 156 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 CAMTA2O94983 1202 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 SLC5A1P13866 664 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 RGS3P49796 1198 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 MGAT2Q10469 447 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 SLC39A6Q13433 755 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 TRIM25Q14258 630 aaKnown RBP5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 CNN3Q15417 329 aaKnown RBP5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 DGKDQ16760 1214 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 DGKKQ5KSL6 1271 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 C9orf50Q5SZB4 431 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZC3H14Q6PJT7 736 aaKnown RBP5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 TEPPQ6URK8 271 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZNF354CQ86Y25 554 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 DRC7Q8IY82 874 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 FLCNQ8NFG4 579 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 KLHDC4Q8TBB5 520 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 PARD3BQ8TEW8 1205 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 ZKSCAN4Q969J2 545 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 RGMAQ96B86 450 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 TMEM209Q96SK2 561 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 MAF1Q9H063 256 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 MANSC1Q9H8J5 431 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 DLL4Q9NR61 685 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 GNL3LQ9NVN8 582 aaKnown RBP5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 FBXO10Q9UK96 956 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 TPCN1Q9ULQ1 816 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 SIT1Q9Y3P8 196 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 USP24Q9UPU5 2620 aa5.6□□□□□ -1.51
HMGB1P23-201ENST00000518743 XIRP2A4UGR9 3374 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 ADGRA2Q96PE1 1338 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 A0A088AWK7 358 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 CCL15-CCL14A0A0B4J2E2 113 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 CFAP69A5D8W1 941 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 A6NNZ2 444 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 F5H423 210 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 NFIBO00712 420 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 PPFIA4O75335 1185 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 CYP7B1O75881 506 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 TGFB1P01137 390 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 FTLP02792 175 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 MYL3P08590 195 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 GSPT1P15170 499 aaKnown RBP5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 TYRP1P17643 537 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 HOXA10P31260 410 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 PRKCZQ05513 592 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 NOLC1Q14978 699 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 RAB3GAP1Q15042 981 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 CCL15Q16663 113 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 PLEKHO1Q53GL0 409 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 DGLUCYQ7Z3D6 616 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 LYSMD2Q8IV50 215 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 SPATA5Q8NB90 893 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 GLB1L3Q8NCI6 653 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 PPP1R35Q8TAP8 253 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 CYFIP2Q96F07 1278 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 SGCZQ96LD1 299 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 SLC6A17Q9H1V8 727 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 MYOZ2Q9NPC6 264 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 CNNM1Q9NRU3 951 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 RTEL1Q9NZ71 1219 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 LIMCH1Q9UPQ0 1083 aa5.59□□□□□ -1.51
HMGB1P23-201ENST00000518743 GVINP1Q7Z2Y8 2422 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 DDX60Q8IY21 1712 aaKnown RBP5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 RHPN2P1A8MT19 583 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 HRKO00198 91 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 PHGDHO43175 533 aaKnown RBP5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 TLR2O60603 784 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 FSBPO95073 299 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 MPIG6BO95866 241 aa5.58□□□□□ -1.52
HMGB1P23-201ENST00000518743 LRG1P02750 347 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms