RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PCYOX1Q9UHG3 505 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 PHF2O75151 1096 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 RNASE9P60153 205 aaKnown RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 PRKCZQ05513 592 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 SURF1Q15526 300 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 TRIM50Q86XT4 487 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 LNX1Q8TBB1 728 aaPredicted RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 ZNF317Q96PQ6 595 aaPredicted RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 RPS6KC1Q96S38 1066 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 CNOT8Q9UFF9 292 aaKnown RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 Q9Y3F1 56 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 ZBTB42B2RXF5 422 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 MAGEB2O15479 319 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 FGGP02679 453 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 LGALS2P05162 132 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 GZMAP12544 262 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 LAMTOR4Q0VGL1 99 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 MFSD14CQ5VZR4 134 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 MFSD5Q6N075 450 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 OLIG1Q8TAK6 271 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 HELQQ8TDG4 1101 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 MSTO1Q9BUK6 570 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 NFKBIZQ9BYH8 718 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 CCDC113Q9H0I3 377 aa19.48■□□□□ 0.71
SDC2-202ENST00000518385 COL1A2P08123 1366 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 GPR25O00155 361 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 DNM1LO00429 736 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 RGS16O15492 202 aaPredicted RBP19.47■□□□□ 0.71
SDC2-202ENST00000518385 DYNC1LI2O43237 492 aaPredicted RBP19.47■□□□□ 0.71
SDC2-202ENST00000518385 TOM1L1O75674 476 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 MARK3P27448 753 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 HOXD10P28358 340 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 SLC8A3P57103 927 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 PRPF4BQ13523 1007 aaKnown RBP19.47■□□□□ 0.71
SDC2-202ENST00000518385 CRYMQ14894 314 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 MAPK6Q16659 721 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 ZACNQ401N2 412 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 WDR44Q5JSH3 913 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 DDX42Q86XP3 938 aaKnown RBP eCLIP19.47■□□□□ 0.71
SDC2-202ENST00000518385 GLYCTKQ8IVS8 523 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 PPM1KQ8N3J5 372 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 GPATCH11Q8N954 259 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 TAS1R2Q8TE23 839 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 TRIB2Q92519 343 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 SEMA4DQ92854 862 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 C16orf70Q9BSU1 422 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 TARS2Q9BW92 718 aaKnown RBP19.47■□□□□ 0.71
SDC2-202ENST00000518385 BATF3Q9NR55 127 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 SLC12A4Q9UP95 1085 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 TRPC6Q9Y210 931 aa19.47■□□□□ 0.71
SDC2-202ENST00000518385 THSD7BQ9C0I4 1608 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 A6NJR5 290 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 CLDN3O15551 220 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 BUB1BO60566 1050 aaPredicted RBP19.46■□□□□ 0.71
SDC2-202ENST00000518385 MSCO60682 206 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 MTA2O94776 668 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 C4BPAP04003 597 aaKnown RBP19.46■□□□□ 0.71
SDC2-202ENST00000518385 MMP3P08254 477 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 DLATP10515 647 aaKnown RBP19.46■□□□□ 0.71
SDC2-202ENST00000518385 TMOD1P28289 359 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 DGKDQ16760 1214 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 QPCTQ16769 361 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 TNFAIP8L3Q5GJ75 292 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 OR2W6PQ8NHA6 318 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 SLC35G2Q8TBE7 412 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 CD99L2Q8TCZ2 262 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 ANKRD27Q96NW4 1050 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 CGRRF1Q99675 332 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 HOMER3Q9NSC5 361 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 SAGE1Q9NXZ1 904 aa19.46■□□□□ 0.71
SDC2-202ENST00000518385 RBAKQ9NYW8 714 aaPredicted RBP19.46■□□□□ 0.71
SDC2-202ENST00000518385 LRRN2O75325 713 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 ITGA4P13612 1032 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 TNNI1P19237 187 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 PDE6CP51160 858 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 BPIFB4P59827 614 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 CYP1B1Q16678 543 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 TRMT10CQ7L0Y3 403 aaKnown RBP19.45■□□□□ 0.7
SDC2-202ENST00000518385 JAMLQ86YT9 394 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 TRPV1Q8NER1 839 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 ATXN2LQ8WWM7 1075 aaKnown RBP19.45■□□□□ 0.7
SDC2-202ENST00000518385 KREMEN1Q96MU8 473 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 POP1Q99575 1024 aaKnown RBP19.45■□□□□ 0.7
SDC2-202ENST00000518385 RNPEPQ9H4A4 650 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 SRRDQ9UH36 339 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 TPX2Q9ULW0 747 aaKnown RBP19.45■□□□□ 0.7
SDC2-202ENST00000518385 ATP8A1Q9Y2Q0 1164 aa19.45■□□□□ 0.7
SDC2-202ENST00000518385 RTN2O75298 545 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 GNRH1P01148 92 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 MMEP08473 750 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 CYBAP13498 195 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 RARGP13631 454 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 AKR1A1P14550 325 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 CTNNA2P26232 953 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 NLRP11P59045 1033 aaKnown RBP19.44■□□□□ 0.7
SDC2-202ENST00000518385 MKRN4PQ13434 485 aaPredicted RBP19.44■□□□□ 0.7
SDC2-202ENST00000518385 TLK2Q86UE8 772 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 ACO2Q99798 780 aaKnown RBP19.44■□□□□ 0.7
SDC2-202ENST00000518385 WNT8AQ9H1J5 351 aa19.44■□□□□ 0.7
SDC2-202ENST00000518385 C1orf112Q9NSG2 853 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms