RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 BMPR1AP36894 532 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 FIGNQ5HY92 759 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 KLHDC7AQ5VTJ3 777 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 SPECC1LQ69YQ0 1117 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 PDXDC1Q6P996 788 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 DSTYKQ6XUX3 929 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 Q7L0L9 218 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.33□□□□□ -0.28
SNX17-208ENST00000493711 METTL23Q86XA0 190 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 SLC39A11Q8N1S5 342 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 APPL2Q8NEU8 664 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 SEMA4DQ92854 862 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 TMEM169Q96HH4 297 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 SUSD3Q96L08 255 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 LSM14BQ9BX40 385 aaKnown RBP13.33□□□□□ -0.28
SNX17-208ENST00000493711 OXCT2Q9BYC2 517 aaPredicted RBP13.33□□□□□ -0.28
SNX17-208ENST00000493711 MTMR10Q9NXD2 777 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 PUF60Q9UHX1 559 aaKnown RBP13.33□□□□□ -0.28
SNX17-208ENST00000493711 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
SNX17-208ENST00000493711 TTC3P53804 2025 aa13.33□□□□□ -0.28
SNX17-208ENST00000493711 LINC01553A4QN01 128 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 GOLGA6L6A8MZA4 724 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 M0QZQ0 153 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 SYN3O14994 580 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 KIF4AO95239 1232 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 SLC9A1P19634 815 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 TYMPP19971 482 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 PBX1P40424 430 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 UBE3AQ05086 875 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 KCNMA1Q12791 1236 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 CUL2Q13617 745 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 BMS1Q14692 1282 aaKnown RBP13.32□□□□□ -0.28
SNX17-208ENST00000493711 VSTM4Q8IW00 320 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 GPR65Q8IYL9 337 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 ZNF397Q8NF99 534 aaPredicted RBP13.32□□□□□ -0.28
SNX17-208ENST00000493711 IGSF21Q96ID5 467 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 FAM84AQ96KN4 292 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 SENP8Q96LD8 212 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
SNX17-208ENST00000493711 MMS19Q96T76 1030 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 NUCKS1Q9H1E3 243 aaKnown RBP13.32□□□□□ -0.28
SNX17-208ENST00000493711 NXF1Q9UBU9 619 aaKnown RBP13.32□□□□□ -0.28
SNX17-208ENST00000493711 MYO6Q9UM54 1294 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 LZTS1Q9Y250 596 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 SSX2IPQ9Y2D8 614 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 SNX9Q9Y5X1 595 aa13.32□□□□□ -0.28
SNX17-208ENST00000493711 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 A0A1W2PQJ5 194 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 C5orf67F2Z3F1 127 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 RBAK-RBAKDNI3L0D1 243 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 CYB561D2O14569 222 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 PPEF2O14830 753 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 B4GALT3O60512 393 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 TACC1O75410 805 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 ADCY5O95622 1261 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 CYP11A1P05108 521 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 UCHL3P15374 230 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 LHX1P48742 406 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 RABGGTBP53611 331 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 PLCB3Q01970 1234 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 DSG2Q14126 1118 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 LRIT3Q3SXY7 679 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
SNX17-208ENST00000493711 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.31□□□□□ -0.28
SNX17-208ENST00000493711 CACNA2D4Q7Z3S7 1137 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 DDX53Q86TM3 631 aaKnown RBP13.31□□□□□ -0.28
SNX17-208ENST00000493711 PPFIBP1Q86W92 1011 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 PAAF1Q9BRP4 392 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 PI4K2AQ9BTU6 479 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 C11orf84Q9BUA3 381 aaPredicted RBP13.31□□□□□ -0.28
SNX17-208ENST00000493711 STK33Q9BYT3 514 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 BCO2Q9BYV7 579 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 SLC28A3Q9HAS3 691 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 UBE2TQ9NPD8 197 aaPredicted RBP13.31□□□□□ -0.28
SNX17-208ENST00000493711 FAM207AQ9NSI2 230 aaPredicted RBP13.31□□□□□ -0.28
SNX17-208ENST00000493711 CEP72Q9P209 647 aa13.31□□□□□ -0.28
SNX17-208ENST00000493711 SPTBN5Q9NRC6 3674 aaKnown RBP13.31□□□□□ -0.28
SNX17-208ENST00000493711 MICAL3Q7RTP6 2002 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 GRXCR1A8MXD5 290 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 H7C4K7 107 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 SPTLC1O15269 473 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 AP5Z1O43299 807 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 CA3P07451 260 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 CCDC172P0C7W6 258 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 CTNNB1P35222 781 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 ASPAP45381 313 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 ERVK-21P61565 698 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 CREMQ03060 361 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 LRMPQ12912 555 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 USP41Q3LFD5 358 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 TIGD5Q53EQ6 642 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 FAM109BQ6ICB4 259 aaPredicted RBP13.3□□□□□ -0.28
SNX17-208ENST00000493711 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 FUT10Q6P4F1 479 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 CD300LGQ6UXG3 332 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 UNC93AQ86WB7 457 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNX17-208ENST00000493711 THEM5Q8N1Q8 247 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 327.6 ms