RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 HUS1O60921 280 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 GNA14O95837 355 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 KRT19P08727 400 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 POU2F2P09086 479 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 IGFBP6P24592 240 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-212ENST00000489728 ERCC5P28715 1186 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-212ENST00000489728 HOXA9P31269 272 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 PMS1P54277 932 aaKnown RBP11.92□□□□□ -0.5
CPSF7-212ENST00000489728 SMARCB1Q12824 385 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 CTXN3Q4LDR2 81 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 OVOS1Q6IE37 1185 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 C15orf39Q6ZRI6 1047 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 LIMS2Q7Z4I7 341 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 FRMD5Q7Z6J6 570 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 FILIP1Q7Z7B0 1213 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 PLEKHO2Q8TD55 490 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 HPDLQ96IR7 371 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 ZDHHC7Q9NXF8 308 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 FBXL5Q9UKA1 691 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 FBXW11Q9UKB1 542 aa11.92□□□□□ -0.5
CPSF7-212ENST00000489728 PLXNA3P51805 1871 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 UNC80Q8N2C7 3258 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 CYB561D2O14569 222 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 TGM5O43548 720 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 PHACTR2O75167 634 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 C4BPAP04003 597 aaKnown RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 HNRNPA1P09651 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 EPCAMP16422 314 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 OR1D2P34982 312 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 NLRP12P59046 1061 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 TRPC3Q13507 836 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 UVSSAQ2YD98 709 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 TJAP1Q5JTD0 557 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 TDRD10Q5VZ19 366 aaKnown RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 LMBRD2Q68DH5 695 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 KLHL10Q6JEL2 608 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 LLGL2Q6P1M3 1020 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 CCDC149Q6ZUS6 474 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 THEM5Q8N1Q8 247 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 ZNF461Q8TAF7 563 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 ZNF516Q92618 1163 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 FAXDC2Q96IV6 333 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 NECTIN4Q96NY8 510 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 DUSP9Q99956 384 aaKnown RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 ADAM7Q9H2U9 754 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 TMEM8AQ9HCN3 771 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 PRDM6Q9NQX0 595 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 HSFX1Q9UBD0 423 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 ARMCX3Q9UH62 379 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 BARX2Q9UMQ3 279 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 CTNND2Q9UQB3 1225 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
CPSF7-212ENST00000489728 MTCL1Q9Y4B5 1905 aaKnown RBP11.91□□□□□ -0.5
CPSF7-212ENST00000489728 TRIM49BA6NDI0 452 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 GRXCR2A6NFK2 248 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 H3BQ06 376 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 PMM2O15305 246 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 ABLIM3O94929 683 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 P4HA1P13674 534 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 ATF2P15336 505 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 RPL17P18621 184 aaKnown RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 LHX1P48742 406 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 DLG4P78352 724 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 ROR1Q01973 937 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 DLX2Q07687 328 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 BIRC3Q13489 604 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 NCOA4Q13772 614 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 SGSM1Q2NKQ1 1148 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 C1orf220Q5T0J3 134 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 LIN9Q5TKA1 542 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 KRT39Q6A163 491 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 CES5AQ6NT32 575 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 SYCE2Q6PIF2 218 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 SV2AQ7L0J3 742 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 TMEM130Q8N3G9 435 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 PDCL2Q8N4E4 241 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 KREMEN2Q8NCW0 462 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 C2orf15Q8WU43 125 aaKnown RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 SUSD6Q92537 303 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 IMPG2Q9BZV3 1241 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 XYLT2Q9H1B5 865 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 S1PR5Q9H228 398 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 FAM124BQ9H5Z6 455 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 MAN1C1Q9NR34 630 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 PRKAG3Q9UGI9 489 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 AFF4Q9UHB7 1163 aaKnown RBP11.9□□□□□ -0.5
CPSF7-212ENST00000489728 SNX9Q9Y5X1 595 aa11.9□□□□□ -0.5
CPSF7-212ENST00000489728 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-212ENST00000489728 GABRDO14764 452 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 ADAM12O43184 909 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 MBTPS2O43462 519 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
CPSF7-212ENST00000489728 TACC1O75410 805 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms