RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 METTL23Q86XA0 190 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 SLC22A17Q8WUG5 538 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 GDAP2Q9NXN4 497 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 TMEM63CQ9P1W3 806 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 ARMCX3Q9UH62 379 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-219ENST00000479941 TIMM13Q9Y5L4 95 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-219ENST00000479941 CDY1Q9Y6F8 540 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 SCN1AP35498 2009 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 VCANP13611 3396 aa11.65□□□□□ -0.54
ATG4B-219ENST00000479941 TGM5O43548 720 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 HUS1O60921 280 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 EPCAMP16422 314 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-219ENST00000479941 KCNA5P22460 613 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 OR1D2P34982 312 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 GCLMP48507 274 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 NCOA4Q13772 614 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 RAB33AQ14088 237 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 SKOR2Q2VWA4 1001 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-219ENST00000479941 CCDC40Q4G0X9 1142 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 KRT39Q6A163 491 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 SCARA3Q6AZY7 606 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 OVOS1Q6IE37 1185 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 LILRA6Q6PI73 481 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 SV2AQ7L0J3 742 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 PALB2Q86YC2 1186 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 GLYCTKQ8IVS8 523 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 THEM5Q8N1Q8 247 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 TMEM86AQ8N2M4 240 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 TOP6BLQ8N6T0 577 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 VN1R2Q8NFZ6 395 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 SPATA18Q8TC71 538 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 ATXN2LQ8WWM7 1075 aaKnown RBP11.64□□□□□ -0.55
ATG4B-219ENST00000479941 TAF4BQ92750 862 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 SRRTQ9BXP5 876 aaKnown RBP11.64□□□□□ -0.55
ATG4B-219ENST00000479941 PLEKHA4Q9H4M7 779 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 VRTNQ9H8Y1 702 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 TMEM8AQ9HCN3 771 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 PRDM6Q9NQX0 595 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 DZANK1Q9NVP4 752 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 CLEC1BQ9P126 229 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 FBXL5Q9UKA1 691 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 BARX2Q9UMQ3 279 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-219ENST00000479941 SNX9Q9Y5X1 595 aa11.64□□□□□ -0.55
ATG4B-219ENST00000479941 OR6C75A6NL08 312 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 TBX10O75333 385 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 VNN1O95497 513 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 FAM163BP0C2L3 166 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 CCDC192P0DO97 292 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 MXI1P50539 228 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 MARSP56192 900 aaKnown RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 MYL6P60660 151 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 RBM10P98175 930 aaKnown RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 DLX2Q07687 328 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 PPP3CAQ08209 521 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 TPD52L1Q16890 204 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 SGSM1Q2NKQ1 1148 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 WDR72Q3MJ13 1102 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 LEXMQ3ZCV2 418 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 DCAF17Q5H9S7 520 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 TCERG1LQ5VWI1 586 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 WSCD1Q658N2 575 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 TPGS2Q68CL5 300 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 ANKRD54Q6NXT1 300 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 CAVIN1Q6NZI2 390 aaKnown RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 RSPO2Q6UXX9 243 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-219ENST00000479941 ZNF461Q8TAF7 563 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 SLC35C1Q96A29 364 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 MSLNLQ96KJ4 702 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 IMPG2Q9BZV3 1241 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 ANO10Q9NW15 660 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 L1RE1Q9UN81 338 aa11.63□□□□□ -0.55
ATG4B-219ENST00000479941 H3BQ06 376 aaPredicted RBP11.62□□□□□ -0.55
ATG4B-219ENST00000479941 ADAM12O43184 909 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 ABLIM3O94929 683 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 LHX1P48742 406 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 TNNC1P63316 161 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 MRPS5P82675 430 aaKnown RBP11.62□□□□□ -0.55
ATG4B-219ENST00000479941 ROR1Q01973 937 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 TFF2Q03403 129 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 ITIH3Q06033 890 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 GPR17Q13304 367 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 STX1AQ16623 288 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 SOWAHAQ2M3V2 549 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 ZNF699Q32M78 642 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 RTL10Q7L3V2 364 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 LIMS2Q7Z4I7 341 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.62□□□□□ -0.55
ATG4B-219ENST00000479941 PDCL2Q8N4E4 241 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 KREMEN2Q8NCW0 462 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 CCDC150Q8NCX0 1101 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 FBXL13Q8NEE6 735 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 MED15Q96RN5 788 aa11.62□□□□□ -0.55
ATG4B-219ENST00000479941 MMS19Q96T76 1030 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms