RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 FZD1Q9UP38 647 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 ADAMTSL3P82987 1691 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CSPG5O95196 566 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 SLC8A1P32418 973 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 PAPOLAP51003 745 aaKnown RBP14.5□□□□□ -0.09
BRAT1-203ENST00000467558 MMEL1Q495T6 779 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CCDC38Q502W7 563 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CRLF3Q8IUI8 442 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 TPX2Q9ULW0 747 aaKnown RBP14.5□□□□□ -0.09
BRAT1-203ENST00000467558 POLIQ9UNA4 740 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 SMAPO00193 183 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 ERVK-9P63128 1117 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 GCNT1Q02742 428 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 PPIL2Q13356 520 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 SPATA18Q8TC71 538 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 ATP6V1E2Q96A05 226 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CELF4Q9BZC1 486 aaKnown RBP14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CYP3A43Q9HB55 503 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 RAB6BQ9NRW1 208 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CISHQ9NSE2 258 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.5□□□□□ -0.09
BRAT1-203ENST00000467558 ANGPTL3Q9Y5C1 460 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 NID2Q14112 1375 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 PSTPIP1O43586 416 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 AGTP01019 485 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 ITGB5P18084 799 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 NFKBIAP25963 317 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 MYL6P60660 151 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 STX1BP61266 288 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 DEUP1Q05D60 604 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 CNPY4Q8N129 248 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 NDUFAF2Q8N183 169 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 METTL5Q9NRN9 209 aaKnown RBP14.5□□□□□ -0.09
BRAT1-203ENST00000467558 EHD2Q9NZN4 543 aa14.5□□□□□ -0.09
BRAT1-203ENST00000467558 APRTP07741 180 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 SKIP12755 728 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 ATICP31939 592 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 COILP38432 576 aaPredicted RBP14.49□□□□□ -0.09
BRAT1-203ENST00000467558 GLRA4Q5JXX5 417 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 CYP4A22Q5TCH4 519 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 LRRC55Q6ZSA7 311 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 FAM47EQ6ZV65 393 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 SLC47A2Q86VL8 602 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 CYFIP2Q96F07 1278 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 PPP1R12CQ9BZL4 782 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 NEU2Q9Y3R4 380 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 ACKR2O00590 384 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 IRF6O14896 467 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 LSM8O95777 96 aaKnown RBP14.49□□□□□ -0.09
BRAT1-203ENST00000467558 RRM1P23921 792 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 ADORA2AP29274 412 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 FAM133BQ5BKY9 247 aaKnown RBP14.49□□□□□ -0.09
BRAT1-203ENST00000467558 DDX42Q86XP3 938 aaKnown RBP eCLIP14.49□□□□□ -0.09
BRAT1-203ENST00000467558 GLIS3Q8NEA6 775 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 ZNF384Q8TF68 577 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 SLC20A1Q8WUM9 679 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 SCG3Q8WXD2 468 aaKnown RBP14.49□□□□□ -0.09
BRAT1-203ENST00000467558 IFT43Q96FT9 208 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 FAM129AQ9BZQ8 928 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 SIK3Q9Y2K2 1263 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 DCTN3O75935 186 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 FAM200BP0CF97 657 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 CASP5P51878 434 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 KCNA1Q09470 495 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 MAPK7Q13164 816 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 FOXR2Q6PJQ5 311 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 CCDC60Q8IWA6 550 aaPredicted RBP14.49□□□□□ -0.09
BRAT1-203ENST00000467558 C9orf72Q96LT7 481 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 SP110Q9HB58 689 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 OSGEPQ9NPF4 335 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 LRRC37A3O60309 1634 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 RGPD2P0DJD1 1756 aa14.49□□□□□ -0.09
BRAT1-203ENST00000467558 GPR182O15218 404 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 UBA1P22314 1058 aaKnown RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 DCAF6Q58WW2 860 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 DCP1BQ8IZD4 617 aaKnown RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 ELMOD1Q8N336 334 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 DCLK2Q8N568 766 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 ACTRT1Q8TDG2 376 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 MTMR8Q96EF0 704 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 TACO1Q9BSH4 297 aaKnown RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 FHDC1Q9C0D6 1143 aaPredicted RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 KLK14Q9P0G3 267 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 PAK5Q9P286 719 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 PHLPP1O60346 1717 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 YDJCA8MPS7 323 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 MCF2P10911 925 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 HNRNPH2P55795 449 aaKnown RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 SMTNL2Q2TAL5 461 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 COBLL1Q53SF7 1204 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 HYIQ5T013 277 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 MEI1Q5TIA1 1274 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 MAML1Q92585 1016 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 SPON2Q9BUD6 331 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 VPS11Q9H270 941 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 INTS13Q9NVM9 706 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 SLIT2O94813 1529 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 MANSC4A6NHS7 340 aaPredicted RBP14.48□□□□□ -0.09
BRAT1-203ENST00000467558 KPNA6O60684 536 aa14.48□□□□□ -0.09
BRAT1-203ENST00000467558 TATDN2Q93075 761 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms