RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TRIM9Q9C026 710 aa15.72■□□□□ 0.11
NIF3L1-205ENST00000409588 TBC1D7Q9P0N9 293 aa15.72■□□□□ 0.11
NIF3L1-205ENST00000409588 RCOR1Q9UKL0 485 aa15.72■□□□□ 0.11
NIF3L1-205ENST00000409588 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
NIF3L1-205ENST00000409588 NUMBLQ9Y6R0 609 aa15.72■□□□□ 0.11
NIF3L1-205ENST00000409588 PVALEFA0A1B0GWK0 134 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 ECI2O75521 394 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 FGF19O95750 216 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 NFICP08651 508 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 ALDH1A3P47895 512 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 ME1P48163 572 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 TUFMP49411 452 aaKnown RBP15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 SV2CQ496J9 727 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 SIX5Q8N196 739 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 RSAD2Q8WXG1 361 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 ZNF560Q96MR9 790 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 FAM213AQ9BRX8 229 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 CGNQ9P2M7 1197 aaKnown RBP15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 ATP6V1DQ9Y5K8 247 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 PDCD11Q14690 1871 aaKnown RBP15.71■□□□□ 0.11
NIF3L1-205ENST00000409588 WDFY4Q6ZS81 3184 aa15.71■□□□□ 0.1
NIF3L1-205ENST00000409588 ZDBF2Q9HCK1 2354 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 KPNA7A9QM74 516 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 CYB561D2O14569 222 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 SEC24AO95486 1093 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 PDGFBP01127 241 aaPredicted RBP15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 EPHB3P54753 998 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 EPHA5P54756 1037 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 VCPP55072 806 aaKnown RBP15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 NTHL1P78549 312 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 KCNA1Q09470 495 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 PARM1Q6UWI2 310 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 RNF19BQ6ZMZ0 732 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 PDZD4Q76G19 769 aaPredicted RBP15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 BRSK2Q8IWQ3 736 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 NPAS3Q8IXF0 933 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 GPD1LQ8N335 351 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 PRSS33Q8NF86 280 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 ITFG1Q8TB96 612 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 SPATA18Q8TC71 538 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 ZNF507Q8TCN5 953 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 E2F7Q96AV8 911 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 CORO1BQ9BR76 489 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 SMOC2Q9H3U7 446 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 HCFC1R1Q9NWW0 138 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 RBAKQ9NYW8 714 aaPredicted RBP15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 USP25Q9UHP3 1055 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 PCDHA7Q9UN72 937 aa15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 R3HCC1Q9Y3T6 440 aaKnown RBP15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 TIMM13Q9Y5L4 95 aaPredicted RBP15.7■□□□□ 0.1
NIF3L1-205ENST00000409588 ZNF233A6NK53 670 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 TISP43B9A030 160 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 POLR2DO15514 142 aaKnown RBP15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 NARSO43776 548 aaKnown RBP15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 MYL1P05976 194 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 CFHP08603 1231 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 NPR3P17342 541 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 CASP5P51878 434 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 PRKCQQ04759 706 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 TWF1Q12792 350 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 TCF15Q12870 199 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 PRSS36Q5K4E3 855 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 RESP18Q5W5W9 173 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 CENPPQ6IPU0 288 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 UNC13DQ70J99 1090 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 ITIH5Q86UX2 942 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 TMEM86AQ8N2M4 240 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 LRRC52Q8N7C0 313 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 TMEM105Q8N8V8 129 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 FLCNQ8NFG4 579 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 FGF14Q92915 247 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 ELSPBP1Q96BH3 223 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 DHX58Q96C10 678 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 NELL2Q99435 816 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 ASAH2Q9NR71 780 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 ZMYM5Q9UJ78 669 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 ITGA11Q9UKX5 1188 aa15.69■□□□□ 0.1
NIF3L1-205ENST00000409588 UBE4BO95155 1302 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 STK25O00506 426 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 SPTLC1O15269 473 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 PRPF6O94906 941 aaKnown RBP15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 RFX1P22670 979 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 GUCY2FP51841 1108 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 STARD6P59095 220 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 ASIC1P78348 528 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 RBP5P82980 135 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 TFAMQ00059 246 aaKnown RBP15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 DUSP4Q13115 394 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 CEP57L1Q8IYX8 460 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 DCP1BQ8IZD4 617 aaKnown RBP15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 GPR152Q8TDT2 470 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 BORCS6Q96GS4 357 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 OSBPL6Q9BZF3 934 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 ZFP14Q9HCL3 533 aa15.68■□□□□ 0.1
NIF3L1-205ENST00000409588 DOCK8Q8NF50 2099 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 PIEZO1Q92508 2521 aa15.67■□□□□ 0.1
NIF3L1-205ENST00000409588 PRPF40AO75400 957 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms