RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 KDM3AQ9Y4C1 1321 aa9.56□□□□□ -0.88
GPN1-202ENST00000407583 A0A0U1RQJ8 604 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 MACROD2A1Z1Q3 448 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 RNF225M0QZC1 329 aaPredicted RBP9.55□□□□□ -0.88
GPN1-202ENST00000407583 HRO43593 1189 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 GFPT2O94808 682 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 TARSP26639 723 aaKnown RBP9.55□□□□□ -0.88
GPN1-202ENST00000407583 CDC25AP30304 524 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 GBP1P32455 592 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 MRPL12P52815 198 aaKnown RBP9.55□□□□□ -0.88
GPN1-202ENST00000407583 ASIC1P78348 528 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 ARHGAP4P98171 946 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 PDE4CQ08493 712 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 HAUS3Q68CZ6 603 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 CACNA2D4Q7Z3S7 1137 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 NEK8Q86SG6 692 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
GPN1-202ENST00000407583 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 AUTS2Q8WXX7 1259 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 NXPE3Q969Y0 559 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 CLDN23Q96B33 292 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 FTHL17Q9BXU8 183 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 LACRTQ9GZZ8 138 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 GLT8D2Q9H1C3 349 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 LRWD1Q9UFC0 647 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 PCDHA6Q9UN73 950 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 PCDHA8Q9Y5H6 950 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 CDY2AQ9Y6F7 541 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 NUMBLQ9Y6R0 609 aa9.55□□□□□ -0.88
GPN1-202ENST00000407583 BAZ2BQ9UIF8 2168 aaKnown RBP9.55□□□□□ -0.88
GPN1-202ENST00000407583 C2orf16Q68DN1 1984 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.54□□□□□ -0.88
GPN1-202ENST00000407583 TRIM49BA6NDI0 452 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 PPP1R37O75864 691 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 LGALS2P05162 132 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 TSPY3P0CV98 308 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 TSPY8P0CW00 308 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 GNAT1P11488 350 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 PLCG1P19174 1290 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 CASP1P29466 404 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 HSPA9P38646 679 aaKnown RBP9.54□□□□□ -0.88
GPN1-202ENST00000407583 CCT5P48643 541 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 NRLP54845 237 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 GPC5P78333 572 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 SRSF1Q07955 248 aaKnown RBP eCLIP9.54□□□□□ -0.88
GPN1-202ENST00000407583 C2orf54Q08AI8 447 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 HTR4Q13639 388 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 ASTE1Q2TB18 679 aaPredicted RBP9.54□□□□□ -0.88
GPN1-202ENST00000407583 ZBTB41Q5SVQ8 909 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 SH3PXD2AQ5TCZ1 1133 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 PDXDC1Q6P996 788 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 ZNF605Q86T29 641 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 TEX2Q8IWB9 1127 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 MAGEC3Q8TD91 643 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 TAF4BQ92750 862 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 GLG1Q92896 1179 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 CDK5RAP3Q96JB5 506 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 ATP6V1G3Q96LB4 118 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 KLHL5Q96PQ7 755 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 NT5C3AQ9H0P0 336 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 SMOC1Q9H4F8 434 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 CNOT10Q9H9A5 744 aaKnown RBP9.54□□□□□ -0.88
GPN1-202ENST00000407583 PLCB1Q9NQ66 1216 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 BMP2KQ9NSY1 1161 aaPredicted RBP9.54□□□□□ -0.88
GPN1-202ENST00000407583 AGPAT5Q9NUQ2 364 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 TRIM10Q9UDY6 481 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 SEC63Q9UGP8 760 aaKnown RBP9.54□□□□□ -0.88
GPN1-202ENST00000407583 INTUQ9ULD6 942 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 PCDHB7Q9Y5E2 793 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 SPTA1P02549 2419 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 FNDC1Q4ZHG4 1894 aaPredicted RBP9.54□□□□□ -0.88
GPN1-202ENST00000407583 RALGAPA1Q6GYQ0 2036 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 LOXHD1Q8IVV2 1947 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
GPN1-202ENST00000407583 PTPN13Q12923 2485 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 H0YHG0 523 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
GPN1-202ENST00000407583 CXCL14O95715 111 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 FAM107AO95990 144 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 ZNF806P0C7X5 589 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 GCFC2P16383 781 aaKnown RBP9.53□□□□□ -0.88
GPN1-202ENST00000407583 NR1D1P20393 614 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 RPS9P46781 194 aaKnown RBP9.53□□□□□ -0.88
GPN1-202ENST00000407583 EIF3BP55884 814 aaKnown RBP9.53□□□□□ -0.88
GPN1-202ENST00000407583 GSCP56915 257 aaPredicted RBP9.53□□□□□ -0.88
GPN1-202ENST00000407583 FKBP3Q00688 224 aaKnown RBP9.53□□□□□ -0.88
GPN1-202ENST00000407583 KRT17Q04695 432 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 PRKCQQ04759 706 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 NAB2Q15742 525 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 SLC18A3Q16572 532 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 AGBL2Q5U5Z8 902 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 SFMBT2Q5VUG0 894 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 RNF43Q68DV7 783 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 ANKRD40Q6AI12 368 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 KCNT2Q6UVM3 1135 aa9.53□□□□□ -0.88
GPN1-202ENST00000407583 VPS36Q86VN1 386 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms