RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PNPLA4P41247 253 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 NOP2P46087 812 aaKnown RBP18.51■□□□□ 0.55
CLDN4-201ENST00000340958 MBTPS1Q14703 1052 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 TRAF7Q6Q0C0 670 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 MRPL10Q7Z7H8 261 aaKnown RBP18.51■□□□□ 0.55
CLDN4-201ENST00000340958 DNAAF5Q86Y56 855 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 SLC35F6Q8N357 371 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 TOX2Q96NM4 488 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 NOX5Q96PH1 765 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 WDR24Q96S15 920 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 SYT11Q9BT88 431 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 TRAIPQ9BWF2 469 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 FTHL17Q9BXU8 183 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 RSAD1Q9HA92 442 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 ARL5CA6NH57 179 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 PITPNM1O00562 1244 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 BUB1O43683 1085 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 ZNF623O75123 536 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 CLTBP09497 229 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 CD19P15391 556 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 CHRNB2P17787 502 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 FMO1Q01740 532 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 FAAP100Q0VG06 881 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 BCO2Q9BYV7 579 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 HIPK3Q9H422 1215 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 GOLGA2P5Q9HBQ8 144 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 RGS18Q9NS28 235 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 CNTN6Q9UQ52 1028 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 INPP5FQ9Y2H2 1132 aa18.51■□□□□ 0.55
CLDN4-201ENST00000340958 RALGAPA2Q2PPJ7 1873 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 PTGESO14684 152 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 PPEF2O14830 753 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 MOCS3O95396 460 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 FTLP02792 175 aaPredicted RBP18.5■□□□□ 0.55
CLDN4-201ENST00000340958 TAF6P49848 677 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 GALCP54803 685 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 AGMOQ6ZNB7 445 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 SLC24A5Q71RS6 500 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 TTC39CQ8N584 583 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 UBE2Q2Q8WVN8 375 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 SEPT8Q92599 483 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 TAS2R14Q9NYV8 317 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 INTUQ9ULD6 942 aa18.5■□□□□ 0.55
CLDN4-201ENST00000340958 CTAGE9A4FU28 777 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 TRIM43BA6NCK2 446 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 RRP9O43818 475 aaKnown RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 RTN2O75298 545 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 SCNN1GP51170 649 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 SV2CQ496J9 727 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 ECHDC2Q86YB7 292 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 PALB2Q86YC2 1186 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 RNF10Q8N5U6 811 aaKnown RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 UBR7Q8N806 425 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 DDX1Q92499 740 aaKnown RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 TRIM43Q96BQ3 446 aaPredicted RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 PPP1R10Q96QC0 940 aaKnown RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 PCDHB18PQ96TA0 734 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 PPP1R12CQ9BZL4 782 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 PIRO00625 290 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 URI1O94763 535 aaPredicted RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 GZMAP12544 262 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 SOX4Q06945 474 aaPredicted RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 IFI16Q16666 785 aaKnown RBP18.49■□□□□ 0.55
CLDN4-201ENST00000340958 PASD1Q8IV76 773 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 TRIM58Q8NG06 486 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 SDCBP2Q9H190 292 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 PRKAG2Q9UGJ0 569 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 NENFQ9UMX5 172 aa18.49■□□□□ 0.55
CLDN4-201ENST00000340958 ANO9A1A5B4 782 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 ANKRD62A6NC57 917 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 KPNA7A9QM74 516 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 MED7O43513 233 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 NBNO60934 754 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 POMCP01189 267 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 NSFP46459 744 aaKnown RBP18.48■□□□□ 0.55
CLDN4-201ENST00000340958 ZNF132P52740 706 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 CCL23P55773 120 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 ORC1Q13415 861 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 TRIM72Q6ZMU5 477 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 ZNF606Q8WXB4 792 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 NAPGQ99747 312 aaPredicted RBP18.48■□□□□ 0.55
CLDN4-201ENST00000340958 TSPYL2Q9H2G4 693 aaPredicted RBP18.48■□□□□ 0.55
CLDN4-201ENST00000340958 TMEM39AQ9NV64 488 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 BARX2Q9UMQ3 279 aaPredicted RBP18.48■□□□□ 0.55
CLDN4-201ENST00000340958 CEP83Q9Y592 693 aa18.48■□□□□ 0.55
CLDN4-201ENST00000340958 TRIP11Q15643 1979 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 EOMESO95936 686 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 TMEM253P0C7T8 217 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 BRD2P25440 801 aaKnown RBP18.47■□□□□ 0.55
CLDN4-201ENST00000340958 ITGB8P26012 769 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 CLEC16AQ2KHT3 1053 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 ACAD10Q6JQN1 1059 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 GLB1LQ6UWU2 654 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 DPH6Q7L8W6 267 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 DBF4BQ8NFT6 615 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 OLIG1Q8TAK6 271 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 TMEM176AQ96HP8 235 aa18.47■□□□□ 0.55
CLDN4-201ENST00000340958 SCLYQ96I15 445 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms