RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CLIC2O15247 247 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 SEC24AO95486 1093 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 ITGB3P05106 788 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 POLR2BP30876 1174 aaKnown RBP29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 NTHL1P78549 312 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 STK4Q13043 487 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 SNRNP35Q16560 246 aaKnown RBP29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 RNF19BQ6ZMZ0 732 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 KRBA2Q6ZNG9 492 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 CSGALNACT2Q8N6G5 542 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 XXYLT1Q8NBI6 393 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 GOLGA5Q8TBA6 731 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 CCDC47Q96A33 483 aaKnown RBP29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 ANKRD36BP1Q96IX9 119 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 GOLPH3LQ9H4A5 285 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 KCNK12Q9HB15 430 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 AGAP1Q9UPQ3 857 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 INSL5Q9Y5Q6 135 aa29.8■■■□□ 2.36
ATPAF1-201ENST00000329231 ZNF202O95125 648 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 RPN1P04843 607 aaKnown RBP29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 CYP2J2P51589 502 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 GPR17Q13304 367 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 PABPC1LQ4VXU2 614 aaKnown RBP29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 C12orf56Q8IXR9 622 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 BORCS6Q96GS4 357 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 CCDC34Q96HJ3 373 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 MTMR12Q9C0I1 747 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 INTS13Q9NVM9 706 aa29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 DNMT3BQ9UBC3 853 aaKnown RBP29.79■■■□□ 2.36
ATPAF1-201ENST00000329231 SCN1AP35498 2009 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 GOLGA6L4A6NEF3 574 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 OR4Q2P0C623 313 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 LAMP2P13473 410 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 RBP5P82980 135 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 HFE2Q6ZVN8 426 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 BMP8AQ7Z5Y6 402 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 LRRC52Q8N7C0 313 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 RDH13Q8NBN7 331 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 KIAA0895Q8NCT3 520 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 NXPE3Q969Y0 559 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 HCFC1R1Q9NWW0 138 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 R3HCC1Q9Y3T6 440 aaKnown RBP29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 MYO10Q9HD67 2058 aa29.78■■■□□ 2.36
ATPAF1-201ENST00000329231 TECTAO75443 2155 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 TNNC2P02585 160 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 KRT19P08727 400 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 PTPN2P17706 415 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 TDGQ13569 410 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 DUOXA2Q1HG44 320 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 THEM5Q8N1Q8 247 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 ELMOD1Q8N336 334 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 MFSD14AQ96MC6 490 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 CDH7Q9ULB5 785 aa29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 CIZ1Q9ULV3 898 aaPredicted RBP29.77■■■□□ 2.36
ATPAF1-201ENST00000329231 WSCD1Q658N2 575 aa29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 LMBRD2Q68DH5 695 aaPredicted RBP29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 WDR49Q8IV35 697 aa29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 CXorf38Q8TB03 319 aa29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 PBXIP1Q96AQ6 731 aa29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 PGLYRP2Q96PD5 576 aa29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 FNBP1Q96RU3 617 aa29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 HCN4Q9Y3Q4 1203 aa29.76■■■□□ 2.35
ATPAF1-201ENST00000329231 PRPF40AO75400 957 aaKnown RBP29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 RHOP08100 348 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 PRR29P0C7W0 189 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 CYP24A1Q07973 514 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 DPYDQ12882 1025 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 OR5B17Q8NGF7 314 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 ASIC4Q96FT7 647 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 FAM84AQ96KN4 292 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 AVENQ9NQS1 362 aaPredicted RBP29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 SIX4Q9UIU6 781 aa29.75■■■□□ 2.35
ATPAF1-201ENST00000329231 EXOC3O60645 756 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 KIF20AO95235 890 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 TWF1Q12792 350 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 BFSP1Q12934 665 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 MYO1EQ12965 1108 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 PSMD6Q15008 389 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 IQCEQ6IPM2 695 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 OR10T2Q8NGX3 314 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 ITFG1Q8TB96 612 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 FGF13Q92913 245 aa29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 ZNF512Q96ME7 567 aaPredicted RBP29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 MRPS23Q9Y3D9 190 aaKnown RBP29.74■■■□□ 2.35
ATPAF1-201ENST00000329231 PTPRJQ12913 1337 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 HUS1O60921 280 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 RHOBTB3O94955 611 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 DLATP10515 647 aaKnown RBP29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 TNNI1P19237 187 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 DUSP4Q13115 394 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 PLD1Q13393 1074 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 TMEM209Q96SK2 561 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 CORO1BQ9BR76 489 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 ZCWPW1Q9H0M4 648 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 SMOC2Q9H3U7 446 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 GDAP2Q9NXN4 497 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 YIPF1Q9Y548 306 aa29.73■■■□□ 2.35
ATPAF1-201ENST00000329231 DOCK6Q96HP0 2047 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 DOCK8Q8NF50 2099 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 MTMR11A4FU01 709 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms