RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 ERVK-9P63128 1117 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 PRAMEP78395 509 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 MROH9Q5TGP6 573 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 LONP2Q86WA8 852 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 WWP1Q9H0M0 922 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 MYOZ2Q9NPC6 264 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 NDE1Q9NXR1 346 aa18■□□□□ 0.47
SLC1A4-201ENST00000234256 IGF2BP3O00425 579 aaKnown RBP eCLIP17.99■□□□□ 0.474e-7■□□□□ 8.7
SLC1A4-201ENST00000234256 KDM7AQ6ZMT4 941 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CREG2Q8IUH2 290 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 NDUFAF2Q8N183 169 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 SLC5A5Q92911 643 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 TATDN2Q93075 761 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 ABTB1Q969K4 478 aaPredicted RBP17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 ARHGEF26Q96DR7 871 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CD248Q9HCU0 757 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 WDR35Q9P2L0 1181 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 TISP43B9A030 160 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CTSHP09668 335 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CUL3Q13618 768 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 EFCAB12Q6NXP0 572 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 MTMR12Q9C0I1 747 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 ACP6Q9NPH0 428 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 METTL5Q9NRN9 209 aaKnown RBP17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 H3BRJ5 948 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 RNF225M0QZC1 329 aaPredicted RBP17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 DDX3XO00571 662 aaKnown RBP eCLIP17.99■□□□□ 0.472e-7■■□□□ 12.4
SLC1A4-201ENST00000234256 LMNAP02545 664 aaKnown RBP17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 ICAM1P05362 532 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 KRT4P19013 534 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 ST13P4Q8IZP2 240 aaPredicted RBP17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CXorf38Q8TB03 319 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 KIAA0391O15091 583 aaKnown RBP17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 TAC1P20366 129 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CASP5P51878 434 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CUL2Q13617 745 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 AMHR2Q16671 573 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 GLRA4Q5JXX5 417 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 EMC1Q8N766 993 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 THTPAQ9BU02 230 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 CDC42EP4Q9H3Q1 356 aaKnown RBP17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 KRT82Q9NSB4 513 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 SLIT1O75093 1534 aa17.99■□□□□ 0.47
SLC1A4-201ENST00000234256 STX3Q13277 289 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 ROPN1BQ9BZX4 212 aaPredicted RBP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 ROPN1Q9HAT0 212 aaPredicted RBP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 JCADQ9P266 1359 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 RNF103-CHMP3A0A140T963 221 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 ZBBXA8MT70 800 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 DFFAO00273 331 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 APOEP02649 317 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 DPEP1P16444 411 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 TSEN2Q8NCE0 465 aaKnown RBP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 BEGAINQ9BUH8 593 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 UBA6A0AVT1 1052 aaPredicted RBP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 PAMP19021 973 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 PAPOLAP51003 745 aaKnown RBP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 RASSF3Q86WH2 238 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 SUN2Q9UH99 717 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 GOLGA8CPA6NN73 597 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 ASAP2O43150 1006 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 ITGB3P05106 788 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 DRP2Q13474 957 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 ARID3BQ8IVW6 561 aaPredicted RBP17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 NT5C1AQ9BXI3 368 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 SMARCAD1Q9H4L7 1026 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 POLIQ9UNA4 740 aa17.98■□□□□ 0.47
SLC1A4-201ENST00000234256 B2RBV5 119 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 GSTA4O15217 222 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 CCDC22O60826 627 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 CLCN3P51790 818 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 IL17AQ16552 155 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 CAPRIN2Q6IMN6 1127 aaKnown RBP17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 WDR59Q6PJI9 974 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 MOXD1Q6UVY6 613 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 ACTRT1Q8TDG2 376 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TNIP3Q96KP6 325 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TRPV6Q9H1D0 765 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 RANBP17Q9H2T7 1088 aaKnown RBP17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TMBIM4Q9HC24 238 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 AIPL1Q9NZN9 384 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 CHEK2O96017 543 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 DCAF6Q58WW2 860 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 KAT5Q92993 513 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 LCMT1Q9UIC8 334 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 FAM237AA0A1B0GTK4 181 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TRIM49D1C9J1S8 452 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 SLITRK3O94933 977 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 RARGP13631 454 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 FNTAP49354 379 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TPI1P60174 286 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TSPY1Q01534 308 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 AFG1LQ8WV93 481 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 SCG3Q8WXD2 468 aaKnown RBP17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TMEM121Q9BTD3 319 aa17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 XAB2Q9HCS7 855 aaKnown RBP17.97■□□□□ 0.47
SLC1A4-201ENST00000234256 TMX2Q9Y320 296 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms