RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Trim47Q8C0E3 641 aa14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Cadm1Q8R5M8 456 aaKnown RBP14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Agap3Q8VHH5 910 aa14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Plagl2Q925T4 496 aa14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Cdk9Q99J95 372 aa14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Smyd3Q9CWR2 428 aa14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Tk2Q9R088 270 aa14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Slc22a3Q9WTW5 551 aa14.71□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Zfp788E9Q980 884 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Farp1F8VPU2 1048 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Atp13a3Q5XF89 1219 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Map2k2Q63932 401 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Rmdn2Q8BSE0 410 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Tmem120aQ8C1E7 343 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 P3h2Q8CG71 703 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Pfdn1Q9CWM4 122 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Snx10Q9CWT3 201 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 1700123K08RikQ9D991 295 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ccdc22Q9JIG7 627 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Gm20721E9Q2U8 318 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ttc39dQ0VF76 604 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ppp1r1bQ60829 194 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Atg9bQ6EBV9 922 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Olfr805Q8VFI4 319 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Anxa13Q99JG3 317 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Cib4Q9D9N5 185 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Scgb2b20Q9JI02 112 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Rps6kb2Q9Z1M4 485 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Gm3187M0QWW3 260 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 YdjcQ14BV6 310 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Tas2r134Q7TQB0 298 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Trim36Q80WG7 729 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Znf598Q80YR4 908 aaKnown RBP14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Uba3Q8C878 462 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Flvcr1B2RXV4 560 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Pdzrn4E9PUZ9 1014 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Gm5689F6Y2A6 97 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Lsp1P19973 330 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Fmr1P35922 614 aaKnown RBP14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Npas2P97460 816 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Krt35Q497I4 455 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Lilrb4Q64281 335 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ephx4Q6IE26 359 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Zbtb5Q7TQG0 670 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 RbakQ8BQC8 711 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Wdr47Q8CGF6 920 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 HlcsQ920N2 722 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Q9CR55 154 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 GgcxQ9QYC7 757 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Zfp846G3X996 541 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 ArP19091 899 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 PolgP54099 1218 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Rgs10Q9CQE5 181 aa14.7□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ap2a2P17427 938 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Irf8P23611 424 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Anxa5P48036 319 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ndufs6P52503 116 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Celf6Q7TN33 460 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 GOLGA7BQ9D428 167 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Cnbd2Q9D5U8 673 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Morc1Q9WVL5 950 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 VcpQ01853 806 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Atp13a5Q3TYU2 1216 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Plekha7Q3UIL6 1118 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Prkaa1Q5EG47 559 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Rpa1Q8VEE4 623 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Gmcl1Q920G9 524 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Pla2g12bQ99P27 195 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 CinpQ9D0V8 212 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 MymkQ9D1N4 221 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 KitP05532 979 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Plekhf1Q3TB82 279 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Serpinb6dQ3UWK8 375 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Kdm7aQ3UWM4 940 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Lrig3Q6P1C6 1117 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 CtifQ6PEE2 600 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Gm7247Q6UY52 187 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ssxb10Q6XAR7 170 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Dlg1Q811D0 905 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Thnsl1Q8BH55 747 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Tmem260Q8BMD6 703 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ttc16Q8C1F5 767 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Pcdhb11Q91UZ8 797 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Apobec3Q99J72 440 aaKnown RBP14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Vta1Q9CR26 309 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Nudt5Q9JKX6 218 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Cul3Q9JLV5 768 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Gm8879F6R3J9 157 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Slc16a1P53986 493 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Pms2P54279 859 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Erbb2P70424 1256 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Shc3Q61120 474 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ptk6Q64434 451 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Smg5Q6ZPY2 1017 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Ccnt2Q7TQK0 723 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Sun2Q8BJS4 731 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Snapc2Q91XA5 359 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Atp11cQ9QZW0 1129 aa14.69□□□□□ -0.06
Col1a1-201ENSMUST00000001547 4930444G20RikD3Z741 495 aa14.68□□□□□ -0.06
Col1a1-201ENSMUST00000001547 Pde9aO70628 534 aa14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms