Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm25239-201ENSMUST00000174915 86 ntBASIC39.4■■■■□ 3.9
Uba3Q8C878 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Uba3Q8C878 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Uba3Q8C878 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Uba3Q8C878 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Uba3Q8C878 Gm15042-201ENSMUST00000120212 883 ntBASIC34.77■■■■□ 3.16
Uba3Q8C878 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
Uba3Q8C878 Gm15045-201ENSMUST00000117359 883 ntBASIC34.08■■■■□ 3.05
Uba3Q8C878 Gm24109-201ENSMUST00000175489 103 ntBASIC33.98■■■■□ 3.03
Uba3Q8C878 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Uba3Q8C878 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Uba3Q8C878 Psd-208ENSMUST00000224556 2034 ntBASIC33.26■■■□□ 2.91
Uba3Q8C878 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Uba3Q8C878 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.05■■■□□ 2.88
Uba3Q8C878 Gm23366-201ENSMUST00000175022 89 ntBASIC32.93■■■□□ 2.86
Uba3Q8C878 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Uba3Q8C878 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
Uba3Q8C878 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Uba3Q8C878 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Uba3Q8C878 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Uba3Q8C878 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Uba3Q8C878 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Uba3Q8C878 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Uba3Q8C878 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
Uba3Q8C878 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Uba3Q8C878 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.21■■■□□ 2.75
Uba3Q8C878 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Uba3Q8C878 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Uba3Q8C878 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Uba3Q8C878 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Uba3Q8C878 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.98■■■□□ 2.71
Uba3Q8C878 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Uba3Q8C878 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.79■■■□□ 2.68
Uba3Q8C878 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Uba3Q8C878 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Uba3Q8C878 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.46■■■□□ 2.63
Uba3Q8C878 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Uba3Q8C878 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Uba3Q8C878 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Uba3Q8C878 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Uba3Q8C878 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.17■■■□□ 2.58
Uba3Q8C878 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Uba3Q8C878 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
Uba3Q8C878 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Uba3Q8C878 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Uba3Q8C878 Gm25238-201ENSMUST00000174914 89 ntBASIC31.01■■■□□ 2.55
Uba3Q8C878 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.98■■■□□ 2.55
Uba3Q8C878 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Uba3Q8C878 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Uba3Q8C878 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.88■■■□□ 2.53
Uba3Q8C878 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Uba3Q8C878 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Uba3Q8C878 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Uba3Q8C878 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Uba3Q8C878 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.72■■■□□ 2.51
Uba3Q8C878 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Uba3Q8C878 Gm27325-201ENSMUST00000175467 74 ntBASIC30.54■■■□□ 2.48
Uba3Q8C878 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Uba3Q8C878 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Uba3Q8C878 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.46■■■□□ 2.47
Uba3Q8C878 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Uba3Q8C878 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Uba3Q8C878 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.39■■■□□ 2.45
Uba3Q8C878 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.36■■■□□ 2.45
Uba3Q8C878 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Uba3Q8C878 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
Uba3Q8C878 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
Uba3Q8C878 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.23■■■□□ 2.43
Uba3Q8C878 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Uba3Q8C878 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Uba3Q8C878 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Uba3Q8C878 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.15■■■□□ 2.42
Uba3Q8C878 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Uba3Q8C878 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Uba3Q8C878 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Uba3Q8C878 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Uba3Q8C878 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.05■■■□□ 2.4
Uba3Q8C878 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Uba3Q8C878 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.03■■■□□ 2.4
Uba3Q8C878 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Uba3Q8C878 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.82■■■□□ 2.36
Uba3Q8C878 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Uba3Q8C878 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
Uba3Q8C878 Rab21-202ENSMUST00000218831 843 ntBASIC29.72■■■□□ 2.35
Uba3Q8C878 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Uba3Q8C878 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Uba3Q8C878 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.69■■■□□ 2.34
Uba3Q8C878 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Uba3Q8C878 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.59■■■□□ 2.33
Uba3Q8C878 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Uba3Q8C878 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Uba3Q8C878 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Uba3Q8C878 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Uba3Q8C878 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Uba3Q8C878 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.49■■■□□ 2.31
Uba3Q8C878 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Uba3Q8C878 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Uba3Q8C878 Gm25262-201ENSMUST00000174934 133 ntBASIC29.47■■■□□ 2.31
Uba3Q8C878 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Uba3Q8C878 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms