Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm25239-201ENSMUST00000174915 86 ntBASIC34.76■■■■□ 3.16
Trim36Q80WG7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Trim36Q80WG7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Trim36Q80WG7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim36Q80WG7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Trim36Q80WG7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trim36Q80WG7 Psd-208ENSMUST00000224556 2034 ntBASIC30.36■■■□□ 2.45
Trim36Q80WG7 Gm15042-201ENSMUST00000120212 883 ntBASIC30.32■■■□□ 2.44
Trim36Q80WG7 Gm24109-201ENSMUST00000175489 103 ntBASIC30.14■■■□□ 2.42
Trim36Q80WG7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Trim36Q80WG7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Trim36Q80WG7 Gm15045-201ENSMUST00000117359 883 ntBASIC29.67■■■□□ 2.34
Trim36Q80WG7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Trim36Q80WG7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Trim36Q80WG7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Trim36Q80WG7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Trim36Q80WG7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Trim36Q80WG7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Trim36Q80WG7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Trim36Q80WG7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trim36Q80WG7 Gm23366-201ENSMUST00000175022 89 ntBASIC29■■■□□ 2.23
Trim36Q80WG7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Trim36Q80WG7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim36Q80WG7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.8■■■□□ 2.2
Trim36Q80WG7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim36Q80WG7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Trim36Q80WG7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim36Q80WG7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trim36Q80WG7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Trim36Q80WG7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Trim36Q80WG7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim36Q80WG7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Trim36Q80WG7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trim36Q80WG7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Trim36Q80WG7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trim36Q80WG7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.12■■■□□ 2.09
Trim36Q80WG7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.09■■■□□ 2.09
Trim36Q80WG7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim36Q80WG7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28■■■□□ 2.07
Trim36Q80WG7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Trim36Q80WG7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.95■■■□□ 2.06
Trim36Q80WG7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Trim36Q80WG7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Trim36Q80WG7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.84■■■□□ 2.05
Trim36Q80WG7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
Trim36Q80WG7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.74■■■□□ 2.03
Trim36Q80WG7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trim36Q80WG7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Trim36Q80WG7 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.57■■■□□ 2
Trim36Q80WG7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Trim36Q80WG7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Trim36Q80WG7 Gm25238-201ENSMUST00000174914 89 ntBASIC27.47■■□□□ 1.99
Trim36Q80WG7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Trim36Q80WG7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Trim36Q80WG7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.41■■□□□ 1.98
Trim36Q80WG7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.4■■□□□ 1.98
Trim36Q80WG7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trim36Q80WG7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.19■■□□□ 1.94
Trim36Q80WG7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Trim36Q80WG7 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.13■■□□□ 1.93
Trim36Q80WG7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim36Q80WG7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Trim36Q80WG7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim36Q80WG7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim36Q80WG7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trim36Q80WG7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim36Q80WG7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Trim36Q80WG7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
Trim36Q80WG7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Trim36Q80WG7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim36Q80WG7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim36Q80WG7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Trim36Q80WG7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim36Q80WG7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trim36Q80WG7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Trim36Q80WG7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.74■■□□□ 1.87
Trim36Q80WG7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.7■■□□□ 1.86
Trim36Q80WG7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim36Q80WG7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Trim36Q80WG7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim36Q80WG7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
Trim36Q80WG7 Gm27325-201ENSMUST00000175467 74 ntBASIC26.58■■□□□ 1.85
Trim36Q80WG7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.55■■□□□ 1.84
Trim36Q80WG7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Trim36Q80WG7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim36Q80WG7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
Trim36Q80WG7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim36Q80WG7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim36Q80WG7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Trim36Q80WG7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim36Q80WG7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.41■■□□□ 1.82
Trim36Q80WG7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
Trim36Q80WG7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim36Q80WG7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim36Q80WG7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.3■■□□□ 1.8
Trim36Q80WG7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Trim36Q80WG7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim36Q80WG7 Gm25262-201ENSMUST00000174934 133 ntBASIC26.28■■□□□ 1.8
Trim36Q80WG7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim36Q80WG7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms