RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C PRM10P42946 383 aa4.42□□□□□ -1.7
YTH1YPR107C MBF1O14467 151 aaKnown RBP4.41□□□□□ -1.7
YTH1YPR107C RPL35AP0CX84 120 aaKnown RBP4.41□□□□□ -1.7
YTH1YPR107C RPL35BP0CX85 120 aaKnown RBP4.41□□□□□ -1.7
YTH1YPR107C GRX8Q05926 109 aa4.41□□□□□ -1.7
YTH1YPR107C TIM9O74700 87 aa4.4□□□□□ -1.71
YTH1YPR107C GCY1P14065 312 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
YTH1YPR107C TRX3P25372 127 aa4.4□□□□□ -1.71
YTH1YPR107C MEI4P29467 408 aa4.4□□□□□ -1.71
YTH1YPR107C YHR180WP38868 163 aa4.4□□□□□ -1.71
YTH1YPR107C CIS3P47001 227 aa4.4□□□□□ -1.71
YTH1YPR107C GRE1Q08969 168 aa4.4□□□□□ -1.71
YTH1YPR107C MRPL17P36528 281 aa4.39□□□□□ -1.71
YTH1YPR107C SRP14P38985 146 aa4.39□□□□□ -1.71
YTH1YPR107C UBC12P52491 188 aa4.39□□□□□ -1.71
YTH1YPR107C DAD3P69850 94 aa4.39□□□□□ -1.71
YTH1YPR107C HNT1Q04344 158 aaKnown RBP4.39□□□□□ -1.71
YTH1YPR107C YOR062CP36025 268 aa4.38□□□□□ -1.71
YTH1YPR107C AIM2P39721 246 aa4.38□□□□□ -1.71
YTH1YPR107C YIP3P53633 176 aa4.38□□□□□ -1.71
YTH1YPR107C YLR031WQ07978 186 aa4.38□□□□□ -1.71
YTH1YPR107C PET9P18239 318 aaKnown RBP4.37□□□□□ -1.71
YTH1YPR107C RAD51P25454 400 aa4.37□□□□□ -1.71
YTH1YPR107C MGT1P26188 188 aa4.37□□□□□ -1.71
YTH1YPR107C SNC2P33328 115 aa4.37□□□□□ -1.71
YTH1YPR107C UMP1P38293 148 aa4.37□□□□□ -1.71
YTH1YPR107C ICE2P40499 491 aa4.37□□□□□ -1.71
YTH1YPR107C GVP36P40531 326 aaKnown RBP4.37□□□□□ -1.71
YTH1YPR107C PEX4P29340 183 aa4.36□□□□□ -1.71
YTH1YPR107C RPL33BP41056 107 aaKnown RBP4.36□□□□□ -1.71
YTH1YPR107C FMP32P43557 207 aa4.36□□□□□ -1.71
YTH1YPR107C ARP3P47117 449 aaKnown RBP4.36□□□□□ -1.71
YTH1YPR107C YLR460CP54007 376 aa4.36□□□□□ -1.71
YTH1YPR107C MRPS8Q03799 155 aa4.36□□□□□ -1.71
YTH1YPR107C SPG3Q04398 127 aaPredicted RBP4.36□□□□□ -1.71
YTH1YPR107C YCR090CP25654 182 aaKnown RBP4.35□□□□□ -1.71
YTH1YPR107C ERV15P38312 142 aa4.35□□□□□ -1.71
YTH1YPR107C SKI6P46948 246 aaPredicted RBP4.35□□□□□ -1.71
YTH1YPR107C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
YTH1YPR107C ATP15P21306 62 aa4.34□□□□□ -1.71
YTH1YPR107C YKE4P40544 346 aa4.34□□□□□ -1.71
YTH1YPR107C ARO8P53090 500 aaKnown RBP4.34□□□□□ -1.71
YTH1YPR107C ARC19P33204 171 aaKnown RBP4.33□□□□□ -1.72
YTH1YPR107C CGI121Q03705 181 aaKnown RBP4.33□□□□□ -1.72
YTH1YPR107C YET1P35723 206 aa4.32□□□□□ -1.72
YTH1YPR107C PHO88P38264 188 aaPredicted RBP4.32□□□□□ -1.72
YTH1YPR107C DOC1P53068 250 aa4.32□□□□□ -1.72
YTH1YPR107C JAC1P53193 184 aa4.32□□□□□ -1.72
YTH1YPR107C YNR062CP53748 327 aa4.32□□□□□ -1.72
YTH1YPR107C DGA1Q08650 418 aa4.32□□□□□ -1.72
YTH1YPR107C YOR283WQ12040 230 aaKnown RBP4.32□□□□□ -1.72
YTH1YPR107C OCH1P31755 480 aa4.31□□□□□ -1.72
YTH1YPR107C MAK5P38112 773 aaPredicted RBP4.31□□□□□ -1.72
YTH1YPR107C YBR285WP38354 144 aa4.31□□□□□ -1.72
YTH1YPR107C TMA22P47089 198 aaPredicted RBP4.31□□□□□ -1.72
YTH1YPR107C YNL247WP53852 767 aaKnown RBP4.31□□□□□ -1.72
YTH1YPR107C YNL140CP53910 189 aa4.31□□□□□ -1.72
YTH1YPR107C RGM1Q00453 211 aa4.31□□□□□ -1.72
YTH1YPR107C AIM34Q03673 198 aa4.31□□□□□ -1.72
YTH1YPR107C LSM4P40070 187 aaKnown RBP4.3□□□□□ -1.72
YTH1YPR107C TIR3P40552 269 aa4.3□□□□□ -1.72
YTH1YPR107C ERG25P53045 309 aa4.3□□□□□ -1.72
YTH1YPR107C YMR315WQ04869 349 aaKnown RBP4.3□□□□□ -1.72
YTH1YPR107C YPR014CQ6B0W2 109 aa4.3□□□□□ -1.72
YTH1YPR107C RPS24AP0CX31 135 aaKnown RBP4.29□□□□□ -1.72
YTH1YPR107C RPS24BP0CX32 135 aaKnown RBP4.29□□□□□ -1.72
YTH1YPR107C SCL1P21243 252 aaKnown RBP4.29□□□□□ -1.72
YTH1YPR107C SEC14P24280 304 aaKnown RBP4.29□□□□□ -1.72
YTH1YPR107C YKR041WP36134 250 aa4.29□□□□□ -1.72
YTH1YPR107C YDR274CP87283 123 aa4.29□□□□□ -1.72
YTH1YPR107C DYN3Q04949 312 aa4.29□□□□□ -1.72
YTH1YPR107C ODC2Q99297 307 aa4.29□□□□□ -1.72
YTH1YPR107C AHC2P25649 128 aa4.28□□□□□ -1.72
YTH1YPR107C RME1P32338 300 aaKnown RBP4.28□□□□□ -1.72
YTH1YPR107C CLG1P35190 452 aa4.28□□□□□ -1.72
YTH1YPR107C SER2P42941 309 aa4.28□□□□□ -1.72
YTH1YPR107C SHH4Q06236 168 aa4.28□□□□□ -1.72
YTH1YPR107C FSF1Q12029 327 aaKnown RBP4.28□□□□□ -1.72
YTH1YPR107C YLR050CQ12155 161 aaKnown RBP4.28□□□□□ -1.72
YTH1YPR107C CPA1P07258 411 aaKnown RBP4.27□□□□□ -1.73
YTH1YPR107C FES1P38260 290 aa4.27□□□□□ -1.73
YTH1YPR107C OPY1P38271 328 aa4.27□□□□□ -1.73
YTH1YPR107C SVP26P38869 228 aa4.27□□□□□ -1.73
YTH1YPR107C NVJ1P38881 321 aa4.27□□□□□ -1.73
YTH1YPR107C TDA4P47153 279 aa4.27□□□□□ -1.73
YTH1YPR107C HPT1Q04178 221 aaKnown RBP4.27□□□□□ -1.73
YTH1YPR107C BRX1Q08235 291 aaKnown RBP4.27□□□□□ -1.73
YTH1YPR107C FMP23P38231 175 aa4.26□□□□□ -1.73
YTH1YPR107C YEA4P40004 342 aa4.26□□□□□ -1.73
YTH1YPR107C YER076CP40049 302 aa4.26□□□□□ -1.73
YTH1YPR107C YER134CP40081 178 aa4.26□□□□□ -1.73
YTH1YPR107C YJR111CP47148 283 aaKnown RBP4.26□□□□□ -1.73
YTH1YPR107C PGA1P53896 198 aa4.26□□□□□ -1.73
YTH1YPR107C NUP49Q02199 472 aa4.26□□□□□ -1.73
YTH1YPR107C SMD2Q06217 110 aaKnown RBP4.26□□□□□ -1.73
YTH1YPR107C MPD1Q12404 318 aaKnown RBP4.26□□□□□ -1.73
YTH1YPR107C ARO7P32178 256 aa4.25□□□□□ -1.73
YTH1YPR107C SHE2P36068 246 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
YTH1YPR107C PAN3P36102 679 aaPredicted RBP4.25□□□□□ -1.73
YTH1YPR107C AVT2P39981 480 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms