RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W IGO2Q9P305 131 aa1.84□□□□□ -2.11
MRPL40YPL173W MBF1O14467 151 aaKnown RBP1.83□□□□□ -2.12
MRPL40YPL173W CAF4P36130 643 aa1.83□□□□□ -2.12
MRPL40YPL173W YKR041WP36134 250 aa1.83□□□□□ -2.12
MRPL40YPL173W PHO88P38264 188 aaPredicted RBP1.83□□□□□ -2.12
MRPL40YPL173W UMP1P38293 148 aa1.83□□□□□ -2.12
MRPL40YPL173W SHG1P38337 142 aa1.83□□□□□ -2.12
MRPL40YPL173W GLE2P40066 365 aa1.83□□□□□ -2.12
MRPL40YPL173W PDS1P40316 373 aaPredicted RBP1.83□□□□□ -2.12
MRPL40YPL173W CIS3P47001 227 aa1.83□□□□□ -2.12
MRPL40YPL173W YJL027CP47063 138 aaPredicted RBP1.83□□□□□ -2.12
MRPL40YPL173W ARP3P47117 449 aaKnown RBP1.83□□□□□ -2.12
MRPL40YPL173W YIP3P53633 176 aa1.83□□□□□ -2.12
MRPL40YPL173W RTC4P53850 401 aa1.83□□□□□ -2.12
MRPL40YPL173W PRM15Q03262 622 aa1.83□□□□□ -2.12
MRPL40YPL173W GRX8Q05926 109 aa1.83□□□□□ -2.12
MRPL40YPL173W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
MRPL40YPL173W YOL024WQ08172 172 aa1.83□□□□□ -2.12
MRPL40YPL173W GCY1P14065 312 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
MRPL40YPL173W SNF6P18888 332 aa1.82□□□□□ -2.12
MRPL40YPL173W TAH1P25638 111 aaPredicted RBP1.82□□□□□ -2.12
MRPL40YPL173W YCR090CP25654 182 aaKnown RBP1.82□□□□□ -2.12
MRPL40YPL173W OCH1P31755 480 aa1.82□□□□□ -2.12
MRPL40YPL173W ERV15P38312 142 aa1.82□□□□□ -2.12
MRPL40YPL173W GVP36P40531 326 aaKnown RBP1.82□□□□□ -2.12
MRPL40YPL173W YKE4P40544 346 aa1.82□□□□□ -2.12
MRPL40YPL173W SKI6P46948 246 aaPredicted RBP1.82□□□□□ -2.12
MRPL40YPL173W BOL2P53082 120 aa1.82□□□□□ -2.12
MRPL40YPL173W JAC1P53193 184 aa1.82□□□□□ -2.12
MRPL40YPL173W GIM5Q04493 163 aa1.82□□□□□ -2.12
MRPL40YPL173W YET3Q07451 203 aa1.82□□□□□ -2.12
MRPL40YPL173W RIO1Q12196 484 aaKnown RBP1.82□□□□□ -2.12
MRPL40YPL173W RME1P32338 300 aaKnown RBP1.81□□□□□ -2.12
MRPL40YPL173W CLG1P35190 452 aa1.81□□□□□ -2.12
MRPL40YPL173W RPL33BP41056 107 aaKnown RBP1.81□□□□□ -2.12
MRPL40YPL173W ARO8P53090 500 aaKnown RBP1.81□□□□□ -2.12
MRPL40YPL173W YNR077CP53758 84 aa1.81□□□□□ -2.12
MRPL40YPL173W HNT1Q04344 158 aaKnown RBP1.81□□□□□ -2.12
MRPL40YPL173W YOR283WQ12040 230 aaKnown RBP1.81□□□□□ -2.12
MRPL40YPL173W QCR6P00127 147 aa1.8□□□□□ -2.12
MRPL40YPL173W DDI2P0CH63 225 aa1.8□□□□□ -2.12
MRPL40YPL173W DDI3P0CH64 225 aa1.8□□□□□ -2.12
MRPL40YPL173W FBA1P14540 359 aaKnown RBP1.8□□□□□ -2.12
MRPL40YPL173W MRPS28P21771 286 aa1.8□□□□□ -2.12
MRPL40YPL173W OPY1P38271 328 aa1.8□□□□□ -2.12
MRPL40YPL173W TIR3P40552 269 aa1.8□□□□□ -2.12
MRPL40YPL173W YJR111CP47148 283 aaKnown RBP1.8□□□□□ -2.12
MRPL40YPL173W YDR274CP87283 123 aa1.8□□□□□ -2.12
MRPL40YPL173W FSF1Q12029 327 aaKnown RBP1.8□□□□□ -2.12
MRPL40YPL173W PDR18P53756 1333 aa1.8□□□□□ -2.12
MRPL40YPL173W SNF4P12904 322 aa1.79□□□□□ -2.12
MRPL40YPL173W CKS1P20486 150 aaKnown RBP1.79□□□□□ -2.12
MRPL40YPL173W ARO7P32178 256 aa1.79□□□□□ -2.12
MRPL40YPL173W SNC2P33328 115 aa1.79□□□□□ -2.12
MRPL40YPL173W ECM4P36156 370 aa1.79□□□□□ -2.12
MRPL40YPL173W NRG2P38082 220 aa1.79□□□□□ -2.12
MRPL40YPL173W MAK5P38112 773 aaPredicted RBP1.79□□□□□ -2.12
MRPL40YPL173W YHR022CP38763 256 aa1.79□□□□□ -2.12
MRPL40YPL173W SVP26P38869 228 aa1.79□□□□□ -2.12
MRPL40YPL173W YNL247WP53852 767 aaKnown RBP1.79□□□□□ -2.12
MRPL40YPL173W YNL140CP53910 189 aa1.79□□□□□ -2.12
MRPL40YPL173W YLR460CP54007 376 aa1.79□□□□□ -2.12
MRPL40YPL173W CYT2Q00873 224 aa1.79□□□□□ -2.12
MRPL40YPL173W YMR315WQ04869 349 aaKnown RBP1.79□□□□□ -2.12
MRPL40YPL173W FUS2Q05670 677 aa1.79□□□□□ -2.12
MRPL40YPL173W SMD2Q06217 110 aaKnown RBP1.79□□□□□ -2.12
MRPL40YPL173W YLR036CQ07986 203 aa1.79□□□□□ -2.12
MRPL40YPL173W BRX1Q08235 291 aaKnown RBP1.79□□□□□ -2.12
MRPL40YPL173W CMC2Q3E7A4 109 aa1.79□□□□□ -2.12
MRPL40YPL173W YIL177CP40434 1758 aa1.79□□□□□ -2.12
MRPL40YPL173W YJL225CP40889 1758 aa1.79□□□□□ -2.12
MRPL40YPL173W CPA1P07258 411 aaKnown RBP1.78□□□□□ -2.12
MRPL40YPL173W TRX3P25372 127 aa1.78□□□□□ -2.12
MRPL40YPL173W RAD51P25454 400 aa1.78□□□□□ -2.12
MRPL40YPL173W TRR1P29509 319 aaKnown RBP1.78□□□□□ -2.12
MRPL40YPL173W YET1P35723 206 aa1.78□□□□□ -2.12
MRPL40YPL173W SER2P42941 309 aa1.78□□□□□ -2.12
MRPL40YPL173W MPC3P53311 146 aa1.78□□□□□ -2.12
MRPL40YPL173W YLR031WQ07978 186 aa1.78□□□□□ -2.12
MRPL40YPL173W DGA1Q08650 418 aa1.78□□□□□ -2.12
MRPL40YPL173W YHR086W-AQ3E746 53 aa1.78□□□□□ -2.12
MRPL40YPL173W YDL085C-AQ3E7B7 68 aaKnown RBP1.78□□□□□ -2.12
MRPL40YPL173W KDX1P36005 433 aa1.77□□□□□ -2.13
MRPL40YPL173W YBR285WP38354 144 aa1.77□□□□□ -2.13
MRPL40YPL173W SRP14P38985 146 aa1.77□□□□□ -2.13
MRPL40YPL173W YEA4P40004 342 aa1.77□□□□□ -2.13
MRPL40YPL173W YER076CP40049 302 aa1.77□□□□□ -2.13
MRPL40YPL173W AGE2P40529 298 aa1.77□□□□□ -2.13
MRPL40YPL173W EAF6P47128 113 aa1.77□□□□□ -2.13
MRPL40YPL173W TDA4P47153 279 aa1.77□□□□□ -2.13
MRPL40YPL173W PGA1P53896 198 aa1.77□□□□□ -2.13
MRPL40YPL173W NAT3Q06504 195 aa1.77□□□□□ -2.13
MRPL40YPL173W ODC2Q99297 307 aa1.77□□□□□ -2.13
MRPL40YPL173W AHC2P25649 128 aa1.76□□□□□ -2.13
MRPL40YPL173W MGT1P26188 188 aa1.76□□□□□ -2.13
MRPL40YPL173W SHE2P36068 246 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
MRPL40YPL173W PAN3P36102 679 aaPredicted RBP1.76□□□□□ -2.13
MRPL40YPL173W NVJ1P38881 321 aa1.76□□□□□ -2.13
MRPL40YPL173W YER121WP40076 114 aa1.76□□□□□ -2.13
MRPL40YPL173W YNL217WP40152 326 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms