RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C OAC1P32332 324 aa2.37□□□□□ -2.03
ATG3YNR007C GLR1P41921 483 aaKnown RBP2.37□□□□□ -2.03
ATG3YNR007C FMP33P46998 180 aa2.37□□□□□ -2.03
ATG3YNR007C VOA1P53262 265 aa2.37□□□□□ -2.03
ATG3YNR007C SYF2P53277 215 aaPredicted RBP2.37□□□□□ -2.03
ATG3YNR007C AAH1P53909 347 aa2.37□□□□□ -2.03
ATG3YNR007C HHT1P61830 136 aa2.37□□□□□ -2.03
ATG3YNR007C YKR005CQ02203 525 aa2.37□□□□□ -2.03
ATG3YNR007C YPL077CQ02831 240 aa2.37□□□□□ -2.03
ATG3YNR007C SNZ1Q03148 297 aa2.37□□□□□ -2.03
ATG3YNR007C YMR279CQ03263 540 aa2.37□□□□□ -2.03
ATG3YNR007C YMD8Q03697 442 aa2.37□□□□□ -2.03
ATG3YNR007C ELP6Q04868 273 aa2.37□□□□□ -2.03
ATG3YNR007C PEX30Q06169 523 aa2.37□□□□□ -2.03
ATG3YNR007C PIN3Q06449 215 aa2.37□□□□□ -2.03
ATG3YNR007C MRX9Q07349 420 aaKnown RBP2.37□□□□□ -2.03
ATG3YNR007C GAT3Q07928 141 aa2.37□□□□□ -2.03
ATG3YNR007C FRE8Q12209 686 aa2.37□□□□□ -2.03
ATG3YNR007C PST2Q12335 198 aaKnown RBP2.37□□□□□ -2.03
ATG3YNR007C QCR7P00128 127 aa2.36□□□□□ -2.03
ATG3YNR007C COX2P00410 251 aa2.36□□□□□ -2.03
ATG3YNR007C SGA1P08019 549 aa2.36□□□□□ -2.03
ATG3YNR007C AHC2P25649 128 aa2.36□□□□□ -2.03
ATG3YNR007C LDS1P31379 325 aa2.36□□□□□ -2.03
ATG3YNR007C ZUO1P32527 433 aaKnown RBP2.36□□□□□ -2.03
ATG3YNR007C SRY1P36007 326 aa2.36□□□□□ -2.03
ATG3YNR007C RCN1P36054 211 aa2.36□□□□□ -2.03
ATG3YNR007C YBR063CP38083 404 aa2.36□□□□□ -2.03
ATG3YNR007C PEX32P38292 413 aa2.36□□□□□ -2.03
ATG3YNR007C IPT1P38954 527 aa2.36□□□□□ -2.03
ATG3YNR007C FLX1P40464 311 aa2.36□□□□□ -2.03
ATG3YNR007C KEG1P43614 200 aa2.36□□□□□ -2.03
ATG3YNR007C LST7P53237 242 aa2.36□□□□□ -2.03
ATG3YNR007C PGA1P53896 198 aa2.36□□□□□ -2.03
ATG3YNR007C OST6Q03723 332 aa2.36□□□□□ -2.03
ATG3YNR007C RIM9Q04734 239 aa2.36□□□□□ -2.03
ATG3YNR007C ADH6Q04894 360 aaKnown RBP2.36□□□□□ -2.03
ATG3YNR007C UPS1Q05776 175 aa2.36□□□□□ -2.03
ATG3YNR007C YGR035W-AQ45U48 73 aa2.36□□□□□ -2.03
ATG3YNR007C COX5BP00425 151 aa2.35□□□□□ -2.03
ATG3YNR007C RPL24AP04449 155 aaKnown RBP2.35□□□□□ -2.03
ATG3YNR007C RPL25P04456 142 aaKnown RBP2.35□□□□□ -2.03
ATG3YNR007C COX9P07255 59 aa2.35□□□□□ -2.03
ATG3YNR007C MATALPHA1P0CY06 175 aa2.35□□□□□ -2.03
ATG3YNR007C HMLALPHA1P0CY07 175 aa2.35□□□□□ -2.03
ATG3YNR007C SNF4P12904 322 aa2.35□□□□□ -2.03
ATG3YNR007C BGL2P15703 313 aaKnown RBP2.35□□□□□ -2.03
ATG3YNR007C STE18P18852 110 aa2.35□□□□□ -2.03
ATG3YNR007C ZRC1P20107 442 aa2.35□□□□□ -2.03
ATG3YNR007C HXT2P23585 541 aa2.35□□□□□ -2.03
ATG3YNR007C RFA3P26755 122 aaKnown RBP2.35□□□□□ -2.03
ATG3YNR007C UBC8P28263 218 aa2.35□□□□□ -2.03
ATG3YNR007C SWD2P36104 329 aaPredicted RBP2.35□□□□□ -2.03
ATG3YNR007C PDX3P38075 228 aaKnown RBP2.35□□□□□ -2.03
ATG3YNR007C RIO2P40160 425 aaKnown RBP2.35□□□□□ -2.03
ATG3YNR007C BMT5P40493 336 aa2.35□□□□□ -2.03
ATG3YNR007C TIR3P40552 269 aa2.35□□□□□ -2.03
ATG3YNR007C MSS2P40990 351 aa2.35□□□□□ -2.03
ATG3YNR007C GNA1P43577 159 aaPredicted RBP2.35□□□□□ -2.03
ATG3YNR007C ERJ5P43613 295 aaPredicted RBP2.35□□□□□ -2.03
ATG3YNR007C RBL2P48606 106 aaKnown RBP2.35□□□□□ -2.03
ATG3YNR007C YGL204CP53089 101 aa2.35□□□□□ -2.03
ATG3YNR007C YGL114WP53134 725 aa2.35□□□□□ -2.03
ATG3YNR007C OKP1P53298 406 aa2.35□□□□□ -2.03
ATG3YNR007C PXR1P53335 271 aaPredicted RBP2.35□□□□□ -2.03
ATG3YNR007C GIM3P53900 129 aa2.35□□□□□ -2.03
ATG3YNR007C HAL1Q01766 294 aa2.35□□□□□ -2.03
ATG3YNR007C RRP17Q04031 235 aaPredicted RBP2.35□□□□□ -2.03
ATG3YNR007C TSA2Q04120 196 aa2.35□□□□□ -2.03
ATG3YNR007C SMP3Q04174 516 aa2.35□□□□□ -2.03
ATG3YNR007C MSC3Q05812 728 aa2.35□□□□□ -2.03
ATG3YNR007C YNG1Q08465 219 aa2.35□□□□□ -2.03
ATG3YNR007C YPR1Q12458 312 aa2.35□□□□□ -2.03
ATG3YNR007C YCL048W-AQ2V2Q2 79 aa2.35□□□□□ -2.03
ATG3YNR007C UBA3Q99344 299 aa2.35□□□□□ -2.03
ATG3YNR007C YLL053CP0CD98 152 aa2.34□□□□□ -2.03
ATG3YNR007C RPL23AP0CX41 137 aaKnown RBP2.34□□□□□ -2.03
ATG3YNR007C RPL23BP0CX42 137 aaKnown RBP2.34□□□□□ -2.03
ATG3YNR007C MRP1P10662 321 aaKnown RBP2.34□□□□□ -2.03
ATG3YNR007C ARO7P32178 256 aa2.34□□□□□ -2.03
ATG3YNR007C VMA11P32842 164 aa2.34□□□□□ -2.03
ATG3YNR007C SNC2P33328 115 aa2.34□□□□□ -2.03
ATG3YNR007C SSH1P38353 490 aaKnown RBP2.34□□□□□ -2.03
ATG3YNR007C PRS2P38620 318 aaKnown RBP2.34□□□□□ -2.03
ATG3YNR007C SMB1P40018 196 aaKnown RBP2.34□□□□□ -2.03
ATG3YNR007C DDI1P40087 428 aa2.34□□□□□ -2.03
ATG3YNR007C MRX5P47007 382 aa2.34□□□□□ -2.03
ATG3YNR007C VHT1P53241 593 aa2.34□□□□□ -2.03
ATG3YNR007C PAU12P53343 120 aa2.34□□□□□ -2.03
ATG3YNR007C RNH201P53942 307 aa2.34□□□□□ -2.03
ATG3YNR007C GRX3Q03835 250 aa2.34□□□□□ -2.03
ATG3YNR007C NEJ1Q06148 342 aa2.34□□□□□ -2.03
ATG3YNR007C DTD1Q07648 150 aaKnown RBP2.34□□□□□ -2.03
ATG3YNR007C YLR126CQ12288 251 aa2.34□□□□□ -2.03
ATG3YNR007C BBP1Q12365 385 aa2.34□□□□□ -2.03
ATG3YNR007C RAX2Q12465 1220 aa2.34□□□□□ -2.03
ATG3YNR007C STF1P01098 86 aa2.33□□□□□ -2.04
ATG3YNR007C RPL39P04650 51 aa2.33□□□□□ -2.04
ATG3YNR007C PET54P10834 293 aa2.33□□□□□ -2.04
ATG3YNR007C MIR1P23641 311 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms