RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W AST2P39945 430 aaKnown RBP0.92□□□□□ -2.26
DDR48YMR173W RFC4P40339 323 aaKnown RBP0.92□□□□□ -2.26
DDR48YMR173W SAY1P53324 424 aa0.92□□□□□ -2.26
DDR48YMR173W YNG1Q08465 219 aa0.92□□□□□ -2.26
DDR48YMR173W MCP1Q12106 302 aa0.92□□□□□ -2.26
DDR48YMR173W ADF1Q2V2Q1 113 aa0.92□□□□□ -2.26
DDR48YMR173W YDR157WA0A023PZE8 133 aa0.91□□□□□ -2.26
DDR48YMR173W TIM9O74700 87 aa0.91□□□□□ -2.26
DDR48YMR173W HTB1P02293 131 aaKnown RBP0.91□□□□□ -2.26
DDR48YMR173W HTB2P02294 131 aa0.91□□□□□ -2.26
DDR48YMR173W VAR1P02381 398 aa0.91□□□□□ -2.26
DDR48YMR173W GPA2P10823 449 aa0.91□□□□□ -2.26
DDR48YMR173W CNB1P25296 175 aa0.91□□□□□ -2.26
DDR48YMR173W RFA3P26755 122 aaKnown RBP0.91□□□□□ -2.26
DDR48YMR173W TAF14P35189 244 aa0.91□□□□□ -2.26
DDR48YMR173W HMF1P40037 129 aaKnown RBP0.91□□□□□ -2.26
DDR48YMR173W GET1P53192 235 aa0.91□□□□□ -2.26
DDR48YMR173W GAS3Q03655 524 aa0.91□□□□□ -2.26
DDR48YMR173W DYN3Q04949 312 aa0.91□□□□□ -2.26
DDR48YMR173W FUS2Q05670 677 aa0.91□□□□□ -2.26
DDR48YMR173W ANT1Q06497 328 aa0.91□□□□□ -2.26
DDR48YMR173W GET4Q12125 312 aa0.91□□□□□ -2.26
DDR48YMR173W ODC2Q99297 307 aa0.91□□□□□ -2.26
DDR48YMR173W ATG40Q99325 256 aa0.91□□□□□ -2.26
DDR48YMR173W PDR18P53756 1333 aa0.9□□□□□ -2.26
DDR48YMR173W TUS1Q06412 1307 aa0.9□□□□□ -2.26
DDR48YMR173W CDC36P06100 191 aaPredicted RBP0.9□□□□□ -2.27
DDR48YMR173W SIR2P06700 562 aa0.9□□□□□ -2.27
DDR48YMR173W ARG80P07249 177 aa0.9□□□□□ -2.27
DDR48YMR173W RPL27AP0C2H6 136 aaKnown RBP0.9□□□□□ -2.27
DDR48YMR173W MER1P16523 270 aa0.9□□□□□ -2.27
DDR48YMR173W CKS1P20486 150 aaKnown RBP0.9□□□□□ -2.27
DDR48YMR173W ASF2P32448 525 aaPredicted RBP0.9□□□□□ -2.27
DDR48YMR173W KDX1P36005 433 aa0.9□□□□□ -2.27
DDR48YMR173W UTP30P36144 274 aaKnown RBP0.9□□□□□ -2.27
DDR48YMR173W ECM4P36156 370 aa0.9□□□□□ -2.27
DDR48YMR173W YNR077CP53758 84 aa0.9□□□□□ -2.27
DDR48YMR173W POP3P53833 195 aaPredicted RBP0.9□□□□□ -2.27
DDR48YMR173W HNT1Q04344 158 aaKnown RBP0.9□□□□□ -2.27
DDR48YMR173W GGA1Q06336 557 aa0.9□□□□□ -2.27
DDR48YMR173W YPL162CQ12042 273 aa0.9□□□□□ -2.27
DDR48YMR173W YDL085C-AQ3E7B7 68 aaKnown RBP0.9□□□□□ -2.27
DDR48YMR173W MET5P47169 1442 aa0.89□□□□□ -2.27
DDR48YMR173W QCR8P08525 94 aa0.89□□□□□ -2.27
DDR48YMR173W ATP15P21306 62 aa0.89□□□□□ -2.27
DDR48YMR173W YCR090CP25654 182 aaKnown RBP0.89□□□□□ -2.27
DDR48YMR173W AIM2P39721 246 aa0.89□□□□□ -2.27
DDR48YMR173W YER034WP40022 185 aaKnown RBP0.89□□□□□ -2.27
DDR48YMR173W ERG10P41338 398 aaKnown RBP0.89□□□□□ -2.27
DDR48YMR173W SKI6P46948 246 aaPredicted RBP0.89□□□□□ -2.27
DDR48YMR173W RTC4P53850 401 aa0.89□□□□□ -2.27
DDR48YMR173W PET191Q02772 108 aa0.89□□□□□ -2.27
DDR48YMR173W GRX3Q03835 250 aa0.89□□□□□ -2.27
DDR48YMR173W CUE4Q04201 117 aaPredicted RBP0.89□□□□□ -2.27
DDR48YMR173W YMR315WQ04869 349 aaKnown RBP0.89□□□□□ -2.27
DDR48YMR173W YLR031WQ07978 186 aa0.89□□□□□ -2.27
DDR48YMR173W YRA1Q12159 226 aaKnown RBP0.89□□□□□ -2.27
DDR48YMR173W YDL180WQ12301 547 aa0.89□□□□□ -2.27
DDR48YMR173W GIS3Q12418 502 aa0.89□□□□□ -2.27
DDR48YMR173W IKI3Q06706 1349 aaKnown RBP0.89□□□□□ -2.27
DDR48YMR173W YLR236CA0A023PZG4 107 aa0.88□□□□□ -2.27
DDR48YMR173W QCR7P00128 127 aa0.88□□□□□ -2.27
DDR48YMR173W MATALPHA2P0CY08 210 aa0.88□□□□□ -2.27
DDR48YMR173W HMLALPHA2P0CY09 210 aa0.88□□□□□ -2.27
DDR48YMR173W SNF4P12904 322 aa0.88□□□□□ -2.27
DDR48YMR173W YPK2P18961 677 aa0.88□□□□□ -2.27
DDR48YMR173W OCH1P31755 480 aa0.88□□□□□ -2.27
DDR48YMR173W OPY1P38271 328 aa0.88□□□□□ -2.27
DDR48YMR173W ERJ5P43613 295 aaPredicted RBP0.88□□□□□ -2.27
DDR48YMR173W EAF6P47128 113 aa0.88□□□□□ -2.27
DDR48YMR173W AIM25P47140 327 aa0.88□□□□□ -2.27
DDR48YMR173W KNH1P50112 268 aa0.88□□□□□ -2.27
DDR48YMR173W MMS2P53152 137 aa0.88□□□□□ -2.27
DDR48YMR173W YCL012CQ8J0M4 134 aa0.88□□□□□ -2.27
DDR48YMR173W YFR032C-BQ8TGU2 87 aa0.88□□□□□ -2.27
DDR48YMR173W MBF1O14467 151 aaKnown RBP0.87□□□□□ -2.27
DDR48YMR173W MRS1P07266 363 aa0.87□□□□□ -2.27
DDR48YMR173W RPS24AP0CX31 135 aaKnown RBP0.87□□□□□ -2.27
DDR48YMR173W RPS24BP0CX32 135 aaKnown RBP0.87□□□□□ -2.27
DDR48YMR173W CBF1P17106 351 aa0.87□□□□□ -2.27
DDR48YMR173W SPS18P32572 300 aa0.87□□□□□ -2.27
DDR48YMR173W CAF4P36130 643 aa0.87□□□□□ -2.27
DDR48YMR173W TVP38P36164 337 aa0.87□□□□□ -2.27
DDR48YMR173W SHG1P38337 142 aa0.87□□□□□ -2.27
DDR48YMR173W YER134CP40081 178 aa0.87□□□□□ -2.27
DDR48YMR173W PDS1P40316 373 aaPredicted RBP0.87□□□□□ -2.27
DDR48YMR173W TMA22P47089 198 aaPredicted RBP0.87□□□□□ -2.27
DDR48YMR173W TDA4P47153 279 aa0.87□□□□□ -2.27
DDR48YMR173W UBC12P52491 188 aa0.87□□□□□ -2.27
DDR48YMR173W MPA43P53583 542 aaPredicted RBP0.87□□□□□ -2.27
DDR48YMR173W YDR274CP87283 123 aa0.87□□□□□ -2.27
DDR48YMR173W YET3Q07451 203 aa0.87□□□□□ -2.27
DDR48YMR173W YHR214C-EQ8TGK0 99 aa0.87□□□□□ -2.27
DDR48YMR173W SEC11P15367 167 aa0.86□□□□□ -2.27
DDR48YMR173W YEA4P40004 342 aa0.86□□□□□ -2.27
DDR48YMR173W YER076CP40049 302 aa0.86□□□□□ -2.27
DDR48YMR173W SER2P42941 309 aa0.86□□□□□ -2.27
DDR48YMR173W FMP32P43557 207 aa0.86□□□□□ -2.27
DDR48YMR173W ARP3P47117 449 aaKnown RBP0.86□□□□□ -2.27
DDR48YMR173W NOP19P53317 196 aaPredicted RBP0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 103.7 ms