RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W YLR173WQ06247 608 aa1.48□□□□□ -2.17
CSI1YMR025W YPR174CQ06616 221 aaPredicted RBP1.48□□□□□ -2.17
CSI1YMR025W YET3Q07451 203 aa1.48□□□□□ -2.17
CSI1YMR025W RRP40Q08285 240 aaKnown RBP1.48□□□□□ -2.17
CSI1YMR025W NOT5Q12514 560 aaPredicted RBP1.48□□□□□ -2.17
CSI1YMR025W UBR1P19812 1950 aa1.47□□□□□ -2.17
CSI1YMR025W CDC8P00572 216 aa1.47□□□□□ -2.17
CSI1YMR025W STP22P25604 385 aa1.47□□□□□ -2.17
CSI1YMR025W GDH2P33327 1092 aaKnown RBP1.47□□□□□ -2.17
CSI1YMR025W MAL32P38158 584 aa1.47□□□□□ -2.17
CSI1YMR025W YBR096WP38256 230 aa1.47□□□□□ -2.17
CSI1YMR025W PEP8P40335 379 aa1.47□□□□□ -2.17
CSI1YMR025W YRB1P41920 201 aaKnown RBP1.47□□□□□ -2.17
CSI1YMR025W ALB1P47019 175 aaPredicted RBP1.47□□□□□ -2.17
CSI1YMR025W RAD17P48581 401 aa1.47□□□□□ -2.17
CSI1YMR025W GTR2P53290 341 aa1.47□□□□□ -2.17
CSI1YMR025W MAL12P53341 584 aa1.47□□□□□ -2.17
CSI1YMR025W SLM2P53955 656 aa1.47□□□□□ -2.17
CSI1YMR025W ASI3P53983 676 aa1.47□□□□□ -2.17
CSI1YMR025W YLR460CP54007 376 aa1.47□□□□□ -2.17
CSI1YMR025W RRN5Q02983 363 aa1.47□□□□□ -2.17
CSI1YMR025W DCR2Q05924 578 aa1.47□□□□□ -2.17
CSI1YMR025W SPO77Q06134 477 aa1.47□□□□□ -2.17
CSI1YMR025W YLR179CQ06252 201 aaKnown RBP1.47□□□□□ -2.17
CSI1YMR025W YOR268CQ08734 132 aa1.47□□□□□ -2.17
CSI1YMR025W GET4Q12125 312 aa1.47□□□□□ -2.17
CSI1YMR025W MSH5Q12175 901 aa1.47□□□□□ -2.17
CSI1YMR025W GEP5Q12393 293 aa1.47□□□□□ -2.17
CSI1YMR025W YHR086W-AQ3E746 53 aa1.47□□□□□ -2.17
CSI1YMR025W YMR030W-AQ3E760 96 aa1.47□□□□□ -2.17
CSI1YMR025W YCL012CQ8J0M4 134 aa1.47□□□□□ -2.17
CSI1YMR025W YSF3P0C074 85 aaPredicted RBP1.46□□□□□ -2.18
CSI1YMR025W YFR010W-AP0C5N0 62 aa1.46□□□□□ -2.18
CSI1YMR025W YHR214C-DP0CX93 97 aa1.46□□□□□ -2.18
CSI1YMR025W NMT1P14743 455 aa1.46□□□□□ -2.18
CSI1YMR025W PBN1P25580 416 aa1.46□□□□□ -2.18
CSI1YMR025W HOM6P31116 359 aaKnown RBP1.46□□□□□ -2.18
CSI1YMR025W YCR087C-AP37263 153 aa1.46□□□□□ -2.18
CSI1YMR025W GRE3P38715 327 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
CSI1YMR025W SOK1P40317 901 aa1.46□□□□□ -2.18
CSI1YMR025W YFR054CP43622 192 aa1.46□□□□□ -2.18
CSI1YMR025W GON7P46984 123 aa1.46□□□□□ -2.18
CSI1YMR025W RPS12P48589 143 aaKnown RBP1.46□□□□□ -2.18
CSI1YMR025W NOP19P53317 196 aaPredicted RBP1.46□□□□□ -2.18
CSI1YMR025W RCF2P53721 224 aa1.46□□□□□ -2.18
CSI1YMR025W YPR147CQ06522 304 aaKnown RBP1.46□□□□□ -2.18
CSI1YMR025W COQ10Q08058 207 aa1.46□□□□□ -2.18
CSI1YMR025W YRA1Q12159 226 aaKnown RBP1.46□□□□□ -2.18
CSI1YMR025W YBL008W-AQ3E821 79 aa1.46□□□□□ -2.18
CSI1YMR025W Q0144Q9ZZW2 109 aa1.46□□□□□ -2.18
CSI1YMR025W FAS1P07149 2051 aaKnown RBP1.46□□□□□ -2.18
CSI1YMR025W SEC16P48415 2195 aaKnown RBP1.45□□□□□ -2.18
CSI1YMR025W DPM1P14020 267 aaKnown RBP1.45□□□□□ -2.18
CSI1YMR025W RNA15P25299 296 aaPredicted RBP1.45□□□□□ -2.18
CSI1YMR025W RNP1P32385 249 aa1.45□□□□□ -2.18
CSI1YMR025W VPS51P36116 164 aa1.45□□□□□ -2.18
CSI1YMR025W GOS1P38736 223 aa1.45□□□□□ -2.18
CSI1YMR025W TEM1P38987 245 aa1.45□□□□□ -2.18
CSI1YMR025W SMX2P40204 77 aaKnown RBP1.45□□□□□ -2.18
CSI1YMR025W YMR144WP40214 342 aaKnown RBP1.45□□□□□ -2.18
CSI1YMR025W FMP32P43557 207 aa1.45□□□□□ -2.18
CSI1YMR025W USE1P53146 245 aa1.45□□□□□ -2.18
CSI1YMR025W CAB4P53332 305 aa1.45□□□□□ -2.18
CSI1YMR025W MET31Q03081 177 aa1.45□□□□□ -2.18
CSI1YMR025W YDR249CQ03787 373 aa1.45□□□□□ -2.18
CSI1YMR025W YDR124WQ04608 324 aa1.45□□□□□ -2.18
CSI1YMR025W YPR098CQ06089 161 aa1.45□□□□□ -2.18
CSI1YMR025W ATG17Q06410 417 aa1.45□□□□□ -2.18
CSI1YMR025W YLR053CQ12026 108 aa1.45□□□□□ -2.18
CSI1YMR025W SMT3Q12306 101 aaKnown RBP1.45□□□□□ -2.18
CSI1YMR025W ATG31Q12421 196 aa1.45□□□□□ -2.18
CSI1YMR025W SNF8Q12483 233 aa1.45□□□□□ -2.18
CSI1YMR025W PSF1Q12488 208 aa1.45□□□□□ -2.18
CSI1YMR025W KSS1P14681 368 aa1.44□□□□□ -2.18
CSI1YMR025W SEC22P22214 214 aa1.44□□□□□ -2.18
CSI1YMR025W SSO1P32867 290 aa1.44□□□□□ -2.18
CSI1YMR025W YOR062CP36025 268 aa1.44□□□□□ -2.18
CSI1YMR025W FES1P38260 290 aa1.44□□□□□ -2.18
CSI1YMR025W LSM4P40070 187 aaKnown RBP1.44□□□□□ -2.18
CSI1YMR025W LIA1P47120 325 aaKnown RBP1.44□□□□□ -2.18
CSI1YMR025W AIF1P52923 378 aa1.44□□□□□ -2.18
CSI1YMR025W NCE101Q02820 53 aa1.44□□□□□ -2.18
CSI1YMR025W SSQ1Q05931 657 aaPredicted RBP1.44□□□□□ -2.18
CSI1YMR025W PAM18Q07914 168 aa1.44□□□□□ -2.18
CSI1YMR025W RPO26P20435 155 aa1.43□□□□□ -2.18
CSI1YMR025W BUB2P26448 306 aaPredicted RBP1.43□□□□□ -2.18
CSI1YMR025W HSP150P32478 413 aa1.43□□□□□ -2.18
CSI1YMR025W CAF4P36130 643 aa1.43□□□□□ -2.18
CSI1YMR025W PRS3P38689 320 aaKnown RBP1.43□□□□□ -2.18
CSI1YMR025W YHL037CP38733 133 aa1.43□□□□□ -2.18
CSI1YMR025W NSG1P38837 291 aa1.43□□□□□ -2.18
CSI1YMR025W BFR1P38934 470 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
CSI1YMR025W AIM2P39721 246 aa1.43□□□□□ -2.18
CSI1YMR025W AYR1P40471 297 aa1.43□□□□□ -2.18
CSI1YMR025W PAC10P48363 199 aa1.43□□□□□ -2.18
CSI1YMR025W MPA43P53583 542 aaPredicted RBP1.43□□□□□ -2.18
CSI1YMR025W YNL010WP53981 241 aaKnown RBP1.43□□□□□ -2.18
CSI1YMR025W SWP1Q02795 286 aa1.43□□□□□ -2.18
CSI1YMR025W YDR476CQ03362 224 aa1.43□□□□□ -2.18
CSI1YMR025W MIX14Q04341 121 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms