RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C CGI121Q03705 181 aaKnown RBP2.29□□□□□ -2.04
PML39YML107C CSM4Q08955 156 aa2.29□□□□□ -2.04
PML39YML107C MEC1P38111 2368 aa2.28□□□□□ -2.04
PML39YML107C HOM6P31116 359 aaKnown RBP2.28□□□□□ -2.04
PML39YML107C SSO1P32867 290 aa2.28□□□□□ -2.04
PML39YML107C YPT52P36018 234 aaKnown RBP2.28□□□□□ -2.04
PML39YML107C VPS51P36116 164 aa2.28□□□□□ -2.04
PML39YML107C AME1P38313 324 aa2.28□□□□□ -2.04
PML39YML107C IKI1P38874 309 aa2.28□□□□□ -2.04
PML39YML107C THO1P40040 218 aaKnown RBP2.28□□□□□ -2.04
PML39YML107C BMT5P40493 336 aa2.28□□□□□ -2.04
PML39YML107C MRH4P53166 561 aa2.28□□□□□ -2.04
PML39YML107C SNZ2P53824 298 aa2.28□□□□□ -2.04
PML39YML107C PRM15Q03262 622 aa2.28□□□□□ -2.04
PML39YML107C RRP40Q08285 240 aaKnown RBP2.28□□□□□ -2.04
PML39YML107C SYC1Q08553 188 aaPredicted RBP2.28□□□□□ -2.04
PML39YML107C EMC6Q12431 108 aa2.28□□□□□ -2.04
PML39YML107C ADE6P38972 1358 aaKnown RBP2.27□□□□□ -2.05
PML39YML107C SWI1P09547 1314 aa2.27□□□□□ -2.05
PML39YML107C URA6P15700 204 aa2.27□□□□□ -2.05
PML39YML107C IDH1P28834 360 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
PML39YML107C YKL075CP36083 450 aa2.27□□□□□ -2.05
PML39YML107C ICE2P40499 491 aa2.27□□□□□ -2.05
PML39YML107C ADO1P47143 340 aaKnown RBP2.27□□□□□ -2.05
PML39YML107C RHO3Q00245 231 aaKnown RBP2.27□□□□□ -2.05
PML39YML107C SNO1Q03144 224 aa2.27□□□□□ -2.05
PML39YML107C SPG4Q04438 115 aa2.27□□□□□ -2.05
PML39YML107C COQ10Q08058 207 aa2.27□□□□□ -2.05
PML39YML107C SNU23Q12368 194 aaPredicted RBP2.27□□□□□ -2.05
PML39YML107C YPL229WQ99395 206 aa2.27□□□□□ -2.05
PML39YML107C SGA1P08019 549 aa2.26□□□□□ -2.05
PML39YML107C SCM4P32564 187 aa2.26□□□□□ -2.05
PML39YML107C FIG1P38224 298 aa2.26□□□□□ -2.05
PML39YML107C COS8P38723 381 aa2.26□□□□□ -2.05
PML39YML107C SRP14P38985 146 aa2.26□□□□□ -2.05
PML39YML107C LSM1P47017 172 aaKnown RBP2.26□□□□□ -2.05
PML39YML107C SNX4P47057 423 aa2.26□□□□□ -2.05
PML39YML107C DAN1P47178 298 aa2.26□□□□□ -2.05
PML39YML107C MIC26P50087 233 aa2.26□□□□□ -2.05
PML39YML107C TOS8P53147 276 aa2.26□□□□□ -2.05
PML39YML107C YGL034CP53186 121 aa2.26□□□□□ -2.05
PML39YML107C YLR460CP54007 376 aa2.26□□□□□ -2.05
PML39YML107C YML096WQ04489 525 aa2.26□□□□□ -2.05
PML39YML107C SPC2Q04969 178 aa2.26□□□□□ -2.05
PML39YML107C YCT1Q12235 531 aa2.26□□□□□ -2.05
PML39YML107C DCN1Q12395 269 aa2.26□□□□□ -2.05
PML39YML107C EMP46Q12396 444 aa2.26□□□□□ -2.05
PML39YML107C MHT1Q12525 324 aa2.26□□□□□ -2.05
PML39YML107C PUT1P09368 476 aa2.25□□□□□ -2.05
PML39YML107C SNA3P14359 133 aa2.25□□□□□ -2.05
PML39YML107C CCA1P21269 546 aa2.25□□□□□ -2.05
PML39YML107C CDC10P25342 322 aaKnown RBP2.25□□□□□ -2.05
PML39YML107C UBC8P28263 218 aa2.25□□□□□ -2.05
PML39YML107C SPS18P32572 300 aa2.25□□□□□ -2.05
PML39YML107C DER1P38307 211 aa2.25□□□□□ -2.05
PML39YML107C YER189WP40104 122 aa2.25□□□□□ -2.05
PML39YML107C ARC15P40518 154 aaRIP-Chip data2.25□□□□□ -2.05not detected
PML39YML107C AGE2P40529 298 aa2.25□□□□□ -2.05
PML39YML107C RSM10Q03201 203 aa2.25□□□□□ -2.05
PML39YML107C USB1Q12208 290 aaKnown RBP2.25□□□□□ -2.05
PML39YML107C LSO2Q3E772 92 aaKnown RBP2.25□□□□□ -2.05
PML39YML107C SIR4P11978 1358 aa2.24□□□□□ -2.05
PML39YML107C YLR462WO13556 202 aa2.24□□□□□ -2.05
PML39YML107C SRY1P36007 326 aa2.24□□□□□ -2.05
PML39YML107C YKR041WP36134 250 aa2.24□□□□□ -2.05
PML39YML107C NRG2P38082 220 aa2.24□□□□□ -2.05
PML39YML107C GRE3P38715 327 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
PML39YML107C TRM5P38793 499 aa2.24□□□□□ -2.05
PML39YML107C YEL075CP39972 122 aa2.24□□□□□ -2.05
PML39YML107C YJR056CP47115 236 aa2.24□□□□□ -2.05
PML39YML107C YJR149WP47177 404 aa2.24□□□□□ -2.05
PML39YML107C NUP57P48837 541 aa2.24□□□□□ -2.05
PML39YML107C JAC1P53193 184 aa2.24□□□□□ -2.05
PML39YML107C RPL28P02406 149 aaKnown RBP2.23□□□□□ -2.05
PML39YML107C QCR2P07257 368 aa2.23□□□□□ -2.05
PML39YML107C DSF1P0CX08 502 aa2.23□□□□□ -2.05
PML39YML107C YNR073CP0CX09 502 aa2.23□□□□□ -2.05
PML39YML107C GCY1P14065 312 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
PML39YML107C YOR062CP36025 268 aa2.23□□□□□ -2.05
PML39YML107C YCR087C-AP37263 153 aa2.23□□□□□ -2.05
PML39YML107C GOS1P38736 223 aa2.23□□□□□ -2.05
PML39YML107C COX15P40086 486 aa2.23□□□□□ -2.05
PML39YML107C PRE6P40303 254 aaKnown RBP2.23□□□□□ -2.05
PML39YML107C TRM9P49957 279 aa2.23□□□□□ -2.05
PML39YML107C YGL235WP53071 178 aa2.23□□□□□ -2.05
PML39YML107C YNG1Q08465 219 aa2.23□□□□□ -2.05
PML39YML107C TPO4Q12256 659 aa2.23□□□□□ -2.05
PML39YML107C YLR126CQ12288 251 aa2.23□□□□□ -2.05
PML39YML107C JLP1Q12358 412 aa2.23□□□□□ -2.05
PML39YML107C PET20Q99373 253 aa2.23□□□□□ -2.05
PML39YML107C YHR139C-AO13536 103 aa2.22□□□□□ -2.05
PML39YML107C SPT3P06844 337 aa2.22□□□□□ -2.05
PML39YML107C BCY1P07278 416 aaKnown RBP2.22□□□□□ -2.05
PML39YML107C DBF2P22204 572 aa2.22□□□□□ -2.05
PML39YML107C NUF2P33895 451 aa2.22□□□□□ -2.05
PML39YML107C CLG1P35190 452 aa2.22□□□□□ -2.05
PML39YML107C MSA2P36157 363 aa2.22□□□□□ -2.05
PML39YML107C POP7P38291 140 aa2.22□□□□□ -2.05
PML39YML107C CUE1P38428 203 aa2.22□□□□□ -2.05
PML39YML107C NRK1P53915 240 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms