RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W MRPS17Q03246 237 aaPredicted RBP1.55□□□□□ -2.16
SMD2YLR275W GPM2Q12008 311 aa1.55□□□□□ -2.16
SMD2YLR275W GET4Q12125 312 aa1.55□□□□□ -2.16
SMD2YLR275W MET5P47169 1442 aa1.55□□□□□ -2.16
SMD2YLR275W YIL177CP40434 1758 aa1.54□□□□□ -2.16
SMD2YLR275W YJL225CP40889 1758 aa1.54□□□□□ -2.16
SMD2YLR275W RPB3P16370 318 aaKnown RBP1.54□□□□□ -2.16
SMD2YLR275W HMF1P40037 129 aaKnown RBP1.54□□□□□ -2.16
SMD2YLR275W AIM25P47140 327 aa1.54□□□□□ -2.16
SMD2YLR275W GET1P53192 235 aa1.54□□□□□ -2.16
SMD2YLR275W PDR18P53756 1333 aa1.54□□□□□ -2.16
SMD2YLR275W CKS1P20486 150 aaKnown RBP1.53□□□□□ -2.16
SMD2YLR275W YGL010WP25338 174 aa1.53□□□□□ -2.16
SMD2YLR275W YBR285WP38354 144 aa1.53□□□□□ -2.16
SMD2YLR275W GAA1P39012 614 aa1.53□□□□□ -2.16
SMD2YLR275W SAY1P53324 424 aa1.53□□□□□ -2.16
SMD2YLR275W YDR274CP87283 123 aa1.53□□□□□ -2.16
SMD2YLR275W YNG1Q08465 219 aa1.53□□□□□ -2.16
SMD2YLR275W FSF1Q12029 327 aaKnown RBP1.53□□□□□ -2.16
SMD2YLR275W YCL012CQ8J0M4 134 aa1.53□□□□□ -2.16
SMD2YLR275W IKI3Q06706 1349 aaKnown RBP1.52□□□□□ -2.17
SMD2YLR275W GLE2P40066 365 aa1.52□□□□□ -2.17
SMD2YLR275W NUP49Q02199 472 aa1.52□□□□□ -2.17
SMD2YLR275W MZM1Q03429 123 aaPredicted RBP1.52□□□□□ -2.17
SMD2YLR275W CSI2Q08054 341 aa1.52□□□□□ -2.17
SMD2YLR275W ABP140Q08641 628 aaKnown RBP1.52□□□□□ -2.17
SMD2YLR275W SIR2P06700 562 aa1.51□□□□□ -2.17
SMD2YLR275W CPA1P07258 411 aaKnown RBP1.51□□□□□ -2.17
SMD2YLR275W RPL27AP0C2H6 136 aaKnown RBP1.51□□□□□ -2.17
SMD2YLR275W ATP15P21306 62 aa1.51□□□□□ -2.17
SMD2YLR275W YBR209WP38311 105 aa1.51□□□□□ -2.17
SMD2YLR275W YBR220CP38318 560 aa1.51□□□□□ -2.17
SMD2YLR275W MMS2P53152 137 aa1.51□□□□□ -2.17
SMD2YLR275W NOP19P53317 196 aaPredicted RBP1.51□□□□□ -2.17
SMD2YLR275W GRX3Q03835 250 aa1.51□□□□□ -2.17
SMD2YLR275W YLR162WQ06235 118 aa1.51□□□□□ -2.17
SMD2YLR275W ANT1Q06497 328 aa1.51□□□□□ -2.17
SMD2YLR275W ATG40Q99325 256 aa1.51□□□□□ -2.17
SMD2YLR275W JIP3O13555 125 aa1.5□□□□□ -2.17
SMD2YLR275W QCR7P00128 127 aa1.5□□□□□ -2.17
SMD2YLR275W TFC1P32367 649 aa1.5□□□□□ -2.17
SMD2YLR275W TMA19P35691 167 aaKnown RBP1.5□□□□□ -2.17
SMD2YLR275W SHE2P36068 246 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
SMD2YLR275W ERJ5P43613 295 aaPredicted RBP1.5□□□□□ -2.17
SMD2YLR275W HNT1Q04344 158 aaKnown RBP1.5□□□□□ -2.17
SMD2YLR275W GGA1Q06336 557 aa1.5□□□□□ -2.17
SMD2YLR275W RPL13BP40212 199 aaKnown RBP1.49□□□□□ -2.17
SMD2YLR275W FUS2Q05670 677 aa1.49□□□□□ -2.17
SMD2YLR275W RPL13AQ12690 199 aaPredicted RBP1.49□□□□□ -2.17
SMD2YLR275W UBR2Q07963 1872 aa1.49□□□□□ -2.17
SMD2YLR275W YLR236CA0A023PZG4 107 aa1.48□□□□□ -2.17
SMD2YLR275W MRS1P07266 363 aa1.48□□□□□ -2.17
SMD2YLR275W FPR1P20081 114 aaKnown RBP1.48□□□□□ -2.17
SMD2YLR275W CNB1P25296 175 aa1.48□□□□□ -2.17
SMD2YLR275W AIM2P39721 246 aa1.48□□□□□ -2.17
SMD2YLR275W ERG10P41338 398 aaKnown RBP1.48□□□□□ -2.17
SMD2YLR275W KNH1P50112 268 aa1.48□□□□□ -2.17
SMD2YLR275W POP3P53833 195 aaPredicted RBP1.48□□□□□ -2.17
SMD2YLR275W RAD9P14737 1309 aa1.47□□□□□ -2.17
SMD2YLR275W MBF1O14467 151 aaKnown RBP1.47□□□□□ -2.17
SMD2YLR275W RPL2AP0CX45 254 aaKnown RBP1.47□□□□□ -2.17
SMD2YLR275W RPL2BP0CX46 254 aaKnown RBP1.47□□□□□ -2.17
SMD2YLR275W YPK2P18961 677 aa1.47□□□□□ -2.17
SMD2YLR275W YCR090CP25654 182 aaKnown RBP1.47□□□□□ -2.17
SMD2YLR275W ASF2P32448 525 aaPredicted RBP1.47□□□□□ -2.17
SMD2YLR275W KDX1P36005 433 aa1.47□□□□□ -2.17
SMD2YLR275W OPY1P38271 328 aa1.47□□□□□ -2.17
SMD2YLR275W CUE4Q04201 117 aaPredicted RBP1.47□□□□□ -2.17
SMD2YLR275W QCR8P08525 94 aa1.46□□□□□ -2.18
SMD2YLR275W GPA2P10823 449 aa1.46□□□□□ -2.18
SMD2YLR275W OCH1P31755 480 aa1.46□□□□□ -2.18
SMD2YLR275W PAN3P36102 679 aaPredicted RBP1.46□□□□□ -2.18
SMD2YLR275W RIO1Q12196 484 aaKnown RBP1.46□□□□□ -2.18
SMD2YLR275W ODC2Q99297 307 aa1.46□□□□□ -2.18
SMD2YLR275W IGO2Q9P305 131 aa1.46□□□□□ -2.18
SMD2YLR275W POR1P04840 283 aaKnown RBP1.45□□□□□ -2.18
SMD2YLR275W UPS2P35200 230 aa1.45□□□□□ -2.18
SMD2YLR275W TVP23P38962 199 aa1.45□□□□□ -2.18
SMD2YLR275W YEA4P40004 342 aa1.45□□□□□ -2.18
SMD2YLR275W DGA1Q08650 418 aa1.45□□□□□ -2.18
SMD2YLR275W RAD28Q12021 506 aa1.45□□□□□ -2.18
SMD2YLR275W YDL180WQ12301 547 aa1.45□□□□□ -2.18
SMD2YLR275W SEC11P15367 167 aa1.44□□□□□ -2.18
SMD2YLR275W TVP38P36164 337 aa1.44□□□□□ -2.18
SMD2YLR275W SKI6P46948 246 aaPredicted RBP1.44□□□□□ -2.18
SMD2YLR275W ARP3P47117 449 aaKnown RBP1.44□□□□□ -2.18
SMD2YLR275W MPC3P53311 146 aa1.44□□□□□ -2.18
SMD2YLR275W RTC4P53850 401 aa1.44□□□□□ -2.18
SMD2YLR275W SPO13P23624 291 aa1.43□□□□□ -2.18
SMD2YLR275W VMA22P38784 181 aa1.43□□□□□ -2.18
SMD2YLR275W PDS1P40316 373 aaPredicted RBP1.43□□□□□ -2.18
SMD2YLR275W SER2P42941 309 aa1.43□□□□□ -2.18
SMD2YLR275W YNL184CP53876 108 aa1.43□□□□□ -2.18
SMD2YLR275W DYN3Q04949 312 aa1.43□□□□□ -2.18
SMD2YLR275W YLR031WQ07978 186 aa1.43□□□□□ -2.18
SMD2YLR275W SNF4P12904 322 aa1.42□□□□□ -2.18
SMD2YLR275W APA2P22108 325 aa1.42□□□□□ -2.18
SMD2YLR275W CAF4P36130 643 aa1.42□□□□□ -2.18
SMD2YLR275W YER034WP40022 185 aaKnown RBP1.42□□□□□ -2.18
SMD2YLR275W YER134CP40081 178 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms