RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C MRX8Q05473 314 aa4.27□□□□□ -1.73
CAF4YKR036C CNL1Q06333 122 aa4.27□□□□□ -1.73
CAF4YKR036C VPS68Q12016 184 aa4.27□□□□□ -1.73
CAF4YKR036C VAM3Q12241 283 aa4.27□□□□□ -1.73
CAF4YKR036C SUL2Q12325 893 aa4.27□□□□□ -1.73
CAF4YKR036C QCR2P07257 368 aa4.27□□□□□ -1.73
CAF4YKR036C YCR025CP25352 136 aa4.27□□□□□ -1.73
CAF4YKR036C AFG1P32317 509 aa4.27□□□□□ -1.73
CAF4YKR036C LSM2P38203 95 aaKnown RBP4.27□□□□□ -1.73
CAF4YKR036C UBS1P38290 277 aa4.27□□□□□ -1.73
CAF4YKR036C SSN3P39073 555 aa4.27□□□□□ -1.73
CAF4YKR036C TIM17P39515 158 aa4.27□□□□□ -1.73
CAF4YKR036C AZF1P41696 914 aa4.27□□□□□ -1.73
CAF4YKR036C SFH5P47008 294 aa4.27□□□□□ -1.73
CAF4YKR036C YIP4P53093 235 aa4.27□□□□□ -1.73
CAF4YKR036C HOL1P53389 586 aa4.27□□□□□ -1.73
CAF4YKR036C PAU4P53427 120 aa4.27□□□□□ -1.73
CAF4YKR036C YNL184CP53876 108 aa4.27□□□□□ -1.73
CAF4YKR036C YMR166CQ03829 368 aa4.27□□□□□ -1.73
CAF4YKR036C THI74Q04083 370 aa4.27□□□□□ -1.73
CAF4YKR036C YMR082CQ04276 118 aa4.27□□□□□ -1.73
CAF4YKR036C DAL4Q04895 635 aa4.27□□□□□ -1.73
CAF4YKR036C STP3Q05937 343 aa4.27□□□□□ -1.73
CAF4YKR036C LOA1Q06508 300 aa4.27□□□□□ -1.73
CAF4YKR036C WIP1Q2V2P8 89 aa4.27□□□□□ -1.73
CAF4YKR036C PAI3P01094 68 aa4.26□□□□□ -1.73
CAF4YKR036C RPS21AP0C0V8 87 aaKnown RBP4.26□□□□□ -1.73
CAF4YKR036C PAU1P0CE88 120 aa4.26□□□□□ -1.73
CAF4YKR036C PAU14P0CE89 120 aa4.26□□□□□ -1.73
CAF4YKR036C PAU6P0CE90 120 aa4.26□□□□□ -1.73
CAF4YKR036C PAU18P0CE91 120 aa4.26□□□□□ -1.73
CAF4YKR036C PAU8P0CE92 120 aa4.26□□□□□ -1.73
CAF4YKR036C PAU11P0CE93 120 aa4.26□□□□□ -1.73
CAF4YKR036C AIM17P23180 465 aaKnown RBP4.26□□□□□ -1.73
CAF4YKR036C MRP49P32388 137 aa4.26□□□□□ -1.73
CAF4YKR036C MDL1P33310 695 aa4.26□□□□□ -1.73
CAF4YKR036C PAU13P38725 120 aa4.26□□□□□ -1.73
CAF4YKR036C TTI2P47168 421 aa4.26□□□□□ -1.73
CAF4YKR036C BXI1P48558 297 aa4.26□□□□□ -1.73
CAF4YKR036C UBC9P50623 157 aaPredicted RBP4.26□□□□□ -1.73
CAF4YKR036C LST7P53237 242 aa4.26□□□□□ -1.73
CAF4YKR036C DUG3P53871 357 aa4.26□□□□□ -1.73
CAF4YKR036C YNL165WP53891 406 aa4.26□□□□□ -1.73
CAF4YKR036C PAU10Q03050 120 aa4.26□□□□□ -1.73
CAF4YKR036C CAB5Q03941 241 aa4.26□□□□□ -1.73
CAF4YKR036C GIM5Q04493 163 aa4.26□□□□□ -1.73
CAF4YKR036C YMR310CQ04867 317 aaPredicted RBP4.26□□□□□ -1.73
CAF4YKR036C YDR286CQ05530 114 aa4.26□□□□□ -1.73
CAF4YKR036C PAU20Q08322 120 aa4.26□□□□□ -1.73
CAF4YKR036C ISA2Q12425 185 aa4.26□□□□□ -1.73
CAF4YKR036C PAU9Q3E770 120 aa4.26□□□□□ -1.73
CAF4YKR036C YOR304C-AO14468 76 aa4.25□□□□□ -1.73
CAF4YKR036C CPA1P07258 411 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C TIR1P10863 254 aa4.25□□□□□ -1.73
CAF4YKR036C NOP1P15646 327 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C OLE1P21147 510 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C FEN2P25621 512 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C AGA2P32781 87 aa4.25□□□□□ -1.73
CAF4YKR036C MRPL16P38064 232 aa4.25□□□□□ -1.73
CAF4YKR036C IML3P38265 245 aa4.25□□□□□ -1.73
CAF4YKR036C YAL037WP39728 267 aa4.25□□□□□ -1.73
CAF4YKR036C YER134CP40081 178 aa4.25□□□□□ -1.73
CAF4YKR036C PRE5P40302 234 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C GPP1P41277 250 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C BUD8P41698 603 aa4.25□□□□□ -1.73
CAF4YKR036C YAR1P46683 200 aa4.25□□□□□ -1.73
CAF4YKR036C YDL183CP48569 320 aa4.25□□□□□ -1.73
CAF4YKR036C YGL235WP53071 178 aa4.25□□□□□ -1.73
CAF4YKR036C SGF73P53165 657 aa4.25□□□□□ -1.73
CAF4YKR036C SNO4Q04902 237 aa4.25□□□□□ -1.73
CAF4YKR036C YDL242WQ07746 117 aa4.25□□□□□ -1.73
CAF4YKR036C YOL024WQ08172 172 aa4.25□□□□□ -1.73
CAF4YKR036C HSP32Q08992 237 aa4.25□□□□□ -1.73
CAF4YKR036C SME1Q12330 94 aaPredicted RBP4.25□□□□□ -1.73
CAF4YKR036C STT4P37297 1900 aa4.25□□□□□ -1.73
CAF4YKR036C ANB1P19211 157 aa4.25□□□□□ -1.73
CAF4YKR036C MAK32P23060 363 aa4.25□□□□□ -1.73
CAF4YKR036C RFA2P26754 273 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C OCH1P31755 480 aa4.25□□□□□ -1.73
CAF4YKR036C SNU13P39990 126 aaKnown RBP4.25□□□□□ -1.73
CAF4YKR036C RPN14P53196 417 aa4.25□□□□□ -1.73
CAF4YKR036C SCW10Q04951 389 aa4.25□□□□□ -1.73
CAF4YKR036C ARR3Q06598 404 aa4.25□□□□□ -1.73
CAF4YKR036C BSC6Q08280 497 aa4.25□□□□□ -1.73
CAF4YKR036C YPL278CQ08990 100 aa4.25□□□□□ -1.73
CAF4YKR036C EMP70P32802 667 aa4.24□□□□□ -1.73
CAF4YKR036C GGC1P38988 300 aa4.24□□□□□ -1.73
CAF4YKR036C PSD1P39006 500 aa4.24□□□□□ -1.73
CAF4YKR036C PIC2P40035 300 aa4.24□□□□□ -1.73
CAF4YKR036C XBP1P40489 647 aa4.24□□□□□ -1.73
CAF4YKR036C PDR16P53860 351 aaKnown RBP4.24□□□□□ -1.73
CAF4YKR036C ELP4Q02884 456 aaKnown RBP4.24□□□□□ -1.73
CAF4YKR036C IZH1Q03419 316 aa4.24□□□□□ -1.73
CAF4YKR036C COQ11Q05892 277 aa4.24□□□□□ -1.73
CAF4YKR036C SEI1Q06058 285 aa4.24□□□□□ -1.73
CAF4YKR036C POS5Q06892 414 aa4.24□□□□□ -1.73
CAF4YKR036C YDL211CQ12121 372 aa4.24□□□□□ -1.73
CAF4YKR036C RPS21BQ3E754 87 aaKnown RBP4.24□□□□□ -1.73
CAF4YKR036C COA2Q3E823 68 aa4.24□□□□□ -1.73
CAF4YKR036C SLY41P22215 453 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms