RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	TRM10	Q12400	293 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	TAR1	Q8TGM6	124 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	SSO2	P39926	295 aa		4.18	□□□□□ -1.74
RSC30	YHR056C	RIB7	P33312	244 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RSC30	YHR056C	FMP33	P46998	180 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	BXI1	P48558	297 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	MSS1	P32559	526 aa	Predicted RBP	4.17	□□□□□ -1.74
RSC30	YHR056C	VMA8	P32610	256 aa	Known RBP	4.17	□□□□□ -1.74
RSC30	YHR056C	DOG2	P38773	246 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	DOG1	P38774	246 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	YER137C	P40083	148 aa	Known RBP	4.17	□□□□□ -1.74
RSC30	YHR056C	RPA34	P47006	233 aa	Predicted RBP	4.17	□□□□□ -1.74
RSC30	YHR056C	UBP8	P50102	471 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	FRE5	Q08908	694 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	TAF3	Q12297	353 aa		4.17	□□□□□ -1.74
RSC30	YHR056C	PRE9	P23638	258 aa	Known RBP	4.16	□□□□□ -1.74
RSC30	YHR056C	MSS2	P40990	351 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	YDR415C	Q04033	374 aa	Predicted RBP	4.16	□□□□□ -1.74
RSC30	YHR056C	ECM25	P32525	599 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	CIN4	P39110	191 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	PCL7	P40186	285 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	LST8	P41318	303 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	YJR120W	P47157	116 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	FMP48	P53233	369 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	RCF1	Q03713	159 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	ASR1	Q06834	288 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	YOL118C	Q08259	102 aa		4.16	□□□□□ -1.74
RSC30	YHR056C	POP5	P28005	173 aa		4.15	□□□□□ -1.74
RSC30	YHR056C	YPS1	P32329	569 aa		4.15	□□□□□ -1.74
RSC30	YHR056C	VMA10	P48836	114 aa	Known RBP	4.15	□□□□□ -1.74
RSC30	YHR056C	SWT21	P53873	357 aa	Predicted RBP	4.15	□□□□□ -1.74
RSC30	YHR056C	RXT3	Q07458	294 aa		4.15	□□□□□ -1.74
RSC30	YHR056C	AEP3	Q12089	606 aa		4.15	□□□□□ -1.74
RSC30	YHR056C	MED4	Q12343	284 aa		4.15	□□□□□ -1.74
RSC30	YHR056C	RPL24A	P04449	155 aa	Known RBP	4.15	□□□□□ -1.75
RSC30	YHR056C	PMR1	P13586	950 aa		4.15	□□□□□ -1.75
RSC30	YHR056C	POR2	P40478	281 aa		4.15	□□□□□ -1.75
RSC30	YHR056C	ASI2	P53895	289 aa		4.15	□□□□□ -1.75
RSC30	YHR056C	SGF11	Q03067	99 aa		4.15	□□□□□ -1.75
RSC30	YHR056C	YPL162C	Q12042	273 aa		4.15	□□□□□ -1.75
RSC30	YHR056C	YGK3	Q12222	375 aa	Predicted RBP	4.15	□□□□□ -1.75
RSC30	YHR056C	GCN4	P03069	281 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	CYC3	P06182	269 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	RTC3	P38804	111 aa	Predicted RBP	4.14	□□□□□ -1.75
RSC30	YHR056C	YJR011C	P47086	261 aa	Predicted RBP	4.14	□□□□□ -1.75
RSC30	YHR056C	YAE1	P47118	141 aa	Predicted RBP	4.14	□□□□□ -1.75
RSC30	YHR056C	CAX4	P53223	239 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	HAL1	Q01766	294 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	NMA1	Q06178	401 aa	Known RBP	4.14	□□□□□ -1.75
RSC30	YHR056C	VAM10	Q08474	114 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	YLR099W-A	Q3E798	87 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	URA6	P15700	204 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	PEP12	P32854	288 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	IRC18	P47056	224 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	IZH3	Q07959	543 aa		4.14	□□□□□ -1.75
RSC30	YHR056C	HAM1	P47119	197 aa	Known RBP	4.13	□□□□□ -1.75
RSC30	YHR056C	MED11	Q99278	115 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	DIT1	P21623	536 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	CDS1	P38221	457 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	SNF11	P38956	169 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	FMP42	Q04991	504 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	LDS2	Q08218	356 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	TIM18	Q08749	192 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	YJR112W-A	Q3E743	109 aa		4.13	□□□□□ -1.75
RSC30	YHR056C	YLL053C	P0CD98	152 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	NOP1	P15646	327 aa	Known RBP	4.12	□□□□□ -1.75
RSC30	YHR056C	VMA22	P38784	181 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	DOC1	P53068	250 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	MEH1	Q02205	184 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	YGL258W-A	Q3E740	77 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	YPT31	P38555	223 aa	Known RBP	4.12	□□□□□ -1.75
RSC30	YHR056C	YAP1802	P53309	568 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	GRX3	Q03835	250 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	RTT103	Q05543	409 aa		4.12	□□□□□ -1.75
RSC30	YHR056C	MRS4	P23500	304 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	ATP3	P38077	311 aa	Known RBP	4.11	□□□□□ -1.75
RSC30	YHR056C	RRT1	P38192	103 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	EGD2	P38879	174 aa	Known RBP	4.11	□□□□□ -1.75
RSC30	YHR056C	MIC26	P50087	233 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	YMR181C	Q03231	154 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	UBA3	Q99344	299 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	MIR1	P23641	311 aa	Known RBP	4.11	□□□□□ -1.75
RSC30	YHR056C	YBR184W	P38299	523 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	SNX4	P47057	423 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	BUL1	P48524	976 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	ORM1	P53224	222 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	SPO19	Q03029	223 aa		4.11	□□□□□ -1.75
RSC30	YHR056C	YEL009C-A	A0A023PZF2	135 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	ERS1	P17261	260 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	AST1	P35183	429 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	RPR2	P40571	144 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	GIM3	P53900	129 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	YFH1	Q07540	174 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	YPR013C	Q12145	317 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	PTC7	P38797	343 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	YNL200C	P40165	246 aa	Known RBP	4.1	□□□□□ -1.75
RSC30	YHR056C	GPN3	Q06543	272 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	SOG2	Q08817	791 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	YPR063C	Q12160	140 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms