RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	AME1	P38313	324 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	EDC3	P39998	551 aa	Known RBP	1.96	□□□□□ -2.1
VMA10	YHR039C-A	CIN5	P40917	295 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	YGR219W	P53307	113 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	IGO1	P53897	168 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	RGM1	Q00453	211 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	YDC1	Q02896	317 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	YDR249C	Q03787	373 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	YOL160W	Q08321	113 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	YPL162C	Q12042	273 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	MCP1	Q12106	302 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	MDM32	Q12171	622 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	ATO3	Q12359	275 aa		1.96	□□□□□ -2.1
VMA10	YHR039C-A	TOP2	P06786	1428 aa	Known RBP	1.96	□□□□□ -2.1
VMA10	YHR039C-A	MAG1	P22134	296 aa	Known RBP	1.95	□□□□□ -2.1
VMA10	YHR039C-A	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.95	□□□□□ -2.1	not detected
VMA10	YHR039C-A	CPR5	P35176	225 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	SRP102	P36057	244 aa	Predicted RBP	1.95	□□□□□ -2.1
VMA10	YHR039C-A	YER121W	P40076	114 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	SOK1	P40317	901 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	YKE4	P40544	346 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	ALB1	P47019	175 aa	Predicted RBP	1.95	□□□□□ -2.1
VMA10	YHR039C-A	AIM25	P47140	327 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	AIF1	P52923	378 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	YGR042W	P53227	271 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	RCF2	P53721	224 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	SWP1	Q02795	286 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	SPG3	Q04398	127 aa	Predicted RBP	1.95	□□□□□ -2.1
VMA10	YHR039C-A	GPM2	Q12008	311 aa		1.95	□□□□□ -2.1
VMA10	YHR039C-A	YOR289W	Q12012	251 aa	Predicted RBP	1.95	□□□□□ -2.1
VMA10	YHR039C-A	USB1	Q12208	290 aa	Known RBP	1.95	□□□□□ -2.1
VMA10	YHR039C-A	QCR2	P07257	368 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	MRS1	P07266	363 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	UTP11	P34247	250 aa	Predicted RBP	1.94	□□□□□ -2.1
VMA10	YHR039C-A	SKG1	P36169	355 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	YAP3	P38749	330 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	AST2	P39945	430 aa	Known RBP	1.94	□□□□□ -2.1
VMA10	YHR039C-A	HMF1	P40037	129 aa	Known RBP	1.94	□□□□□ -2.1
VMA10	YHR039C-A	YIP3	P53633	176 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	DAD3	P69850	94 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	MRPS8	Q03799	155 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	YFR032C-B	Q8TGU2	87 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	PET20	Q99373	253 aa		1.94	□□□□□ -2.1
VMA10	YHR039C-A	RPO41	P13433	1351 aa	Known RBP	1.94	□□□□□ -2.1
VMA10	YHR039C-A	RAD50	P12753	1312 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	SNT2	P53127	1403 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	RPB3	P16370	318 aa	Known RBP	1.93	□□□□□ -2.1
VMA10	YHR039C-A	SCL1	P21243	252 aa	Known RBP	1.93	□□□□□ -2.1
VMA10	YHR039C-A	PEX4	P29340	183 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	MRPL17	P36528	281 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	FCY21	P40039	528 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	PGD1	P40356	397 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	POG1	P40473	351 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	CIS3	P47001	227 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	YJR111C	P47148	283 aa	Known RBP	1.93	□□□□□ -2.1
VMA10	YHR039C-A	DAN1	P47178	298 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	YGL204C	P53089	101 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	YNR062C	P53748	327 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	ARO80	Q04052	950 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	YOR283W	Q12040	230 aa	Known RBP	1.93	□□□□□ -2.1
VMA10	YHR039C-A	TSC3	Q3E790	80 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	TY1B-H	O13535	1793 aa		1.93	□□□□□ -2.1
VMA10	YHR039C-A	TIM9	O74700	87 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	SIR2	P06700	562 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	BET1	P22804	142 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	CNB1	P25296	175 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	CLG1	P35190	452 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	PHO88	P38264	188 aa	Predicted RBP	1.92	□□□□□ -2.1
VMA10	YHR039C-A	CYC2	P38909	366 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	SRP14	P38985	146 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	DYN3	Q04949	312 aa		1.92	□□□□□ -2.1
VMA10	YHR039C-A	RAS2	P01120	322 aa	Known RBP	1.91	□□□□□ -2.1
VMA10	YHR039C-A	URA5	P13298	226 aa	Known RBP	1.91	□□□□□ -2.1
VMA10	YHR039C-A	ATP15	P21306	62 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	UMP1	P38293	148 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	ERV15	P38312	142 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	YJL027C	P47063	138 aa	Predicted RBP	1.91	□□□□□ -2.1
VMA10	YHR039C-A	DOC1	P53068	250 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	YNL140C	P53910	189 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	YLR460C	P54007	376 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	1.91	□□□□□ -2.1	not detected
VMA10	YHR039C-A	RFU1	Q08003	200 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	YLR053C	Q12026	108 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	TAF2	P23255	1407 aa		1.91	□□□□□ -2.1
VMA10	YHR039C-A	PET9	P18239	318 aa	Known RBP	1.9	□□□□□ -2.11
VMA10	YHR039C-A	MRPS28	P21771	286 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	YCR101C	P25607	182 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	HSP30	P25619	332 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	DER1	P38307	211 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	SHG1	P38337	142 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	GVP36	P40531	326 aa	Known RBP	1.9	□□□□□ -2.11
VMA10	YHR039C-A	RPL33B	P41056	107 aa	Known RBP	1.9	□□□□□ -2.11
VMA10	YHR039C-A	UBC12	P52491	188 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	SBH2	P52871	88 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	YGL235W	P53071	178 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	NQM1	P53228	333 aa	Predicted RBP	1.9	□□□□□ -2.11
VMA10	YHR039C-A	YNL184C	P53876	108 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	DAS2	Q12084	232 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	IGO2	Q9P305	131 aa		1.9	□□□□□ -2.11
VMA10	YHR039C-A	REV3	P14284	1504 aa		1.9	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 79 ms