RNA–Protein interactions for RNA: YFR021W

ATG18, Transcript of Phosphoinositide binding protein, yeast

Gene ATG18, Length 1,503 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG18	YFR021W	COS8	P38723	381 aa		4.24	□□□□□ -1.73
ATG18	YFR021W	NVJ1	P38881	321 aa		4.24	□□□□□ -1.73
ATG18	YFR021W	LSM4	P40070	187 aa	Known RBP	4.24	□□□□□ -1.73
ATG18	YFR021W	YFL012W	P43580	148 aa		4.24	□□□□□ -1.73
ATG18	YFR021W	YGL235W	P53071	178 aa		4.24	□□□□□ -1.73
ATG18	YFR021W	FCF1	Q05498	189 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG18	YFR021W	NSL1	Q12143	216 aa		4.24	□□□□□ -1.73
ATG18	YFR021W	IRC20	Q06554	1556 aa		4.24	□□□□□ -1.73
ATG18	YFR021W	YPR170W-B	P0C5R9	85 aa		4.23	□□□□□ -1.73
ATG18	YFR021W	YCR090C	P25654	182 aa	Known RBP	4.23	□□□□□ -1.73
ATG18	YFR021W	FIS1	P40515	155 aa		4.23	□□□□□ -1.73
ATG18	YFR021W	YFR045W	P43617	309 aa		4.23	□□□□□ -1.73
ATG18	YFR021W	RSM10	Q03201	203 aa		4.23	□□□□□ -1.73
ATG18	YFR021W	GAS3	Q03655	524 aa		4.23	□□□□□ -1.73
ATG18	YFR021W	YLR053C	Q12026	108 aa		4.23	□□□□□ -1.73
ATG18	YFR021W	GEA2	P39993	1459 aa	Known RBP	4.23	□□□□□ -1.73
ATG18	YFR021W	CNB1	P25296	175 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	YAR068W	P39564	161 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	FMP32	P43557	207 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	MIG2	P53035	382 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	PET20	Q99373	253 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-JR2	P47100	1755 aa	Known RBP	4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-ER2	Q03619	1755 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-MR1	Q04214	1755 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-NL1	Q12112	1755 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-GR1	Q12141	1755 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	TY1B-BL	Q12490	1755 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	CDC25	P04821	1589 aa		4.22	□□□□□ -1.73
ATG18	YFR021W	MBF1	O14467	151 aa	Known RBP	4.21	□□□□□ -1.73
ATG18	YFR021W	AST2	P39945	430 aa	Known RBP	4.21	□□□□□ -1.73
ATG18	YFR021W	EDC3	P39998	551 aa	Known RBP	4.21	□□□□□ -1.73
ATG18	YFR021W	YFH7	P43591	353 aa		4.21	□□□□□ -1.73
ATG18	YFR021W	LSM1	P47017	172 aa	Known RBP	4.21	□□□□□ -1.73
ATG18	YFR021W	HST4	P53688	370 aa		4.21	□□□□□ -1.73
ATG18	YFR021W	YPL162C	Q12042	273 aa		4.21	□□□□□ -1.73
ATG18	YFR021W	GDB1	Q06625	1536 aa		4.21	□□□□□ -1.74
ATG18	YFR021W	ATG22	P25568	528 aa		4.21	□□□□□ -1.74
ATG18	YFR021W	UTP30	P36144	274 aa	Known RBP	4.21	□□□□□ -1.74
ATG18	YFR021W	POP4	P38336	279 aa		4.21	□□□□□ -1.74
ATG18	YFR021W	GLE2	P40066	365 aa		4.21	□□□□□ -1.74
ATG18	YFR021W	RSM25	P40496	264 aa		4.21	□□□□□ -1.74
ATG18	YFR021W	PEX11	Q12462	236 aa		4.21	□□□□□ -1.74
ATG18	YFR021W	ARO1	P08566	1588 aa	Known RBP	4.2	□□□□□ -1.74
ATG18	YFR021W	PDR5	P33302	1511 aa	Known RBP	4.2	□□□□□ -1.74
ATG18	YFR021W	RPS24A	P0CX31	135 aa	Known RBP	4.2	□□□□□ -1.74
ATG18	YFR021W	RPS24B	P0CX32	135 aa	Known RBP	4.2	□□□□□ -1.74
ATG18	YFR021W	AHC2	P25649	128 aa		4.2	□□□□□ -1.74
ATG18	YFR021W	SEC17	P32602	292 aa		4.2	□□□□□ -1.74
ATG18	YFR021W	MRPS9	P38120	278 aa		4.2	□□□□□ -1.74
ATG18	YFR021W	RIO1	Q12196	484 aa	Known RBP	4.2	□□□□□ -1.74
ATG18	YFR021W	RDI1	Q12434	202 aa		4.2	□□□□□ -1.74
ATG18	YFR021W	RAD10	P06838	210 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	RPS28B	P0C0X0	67 aa	Known RBP	4.19	□□□□□ -1.74
ATG18	YFR021W	SRP102	P36057	244 aa	Predicted RBP	4.19	□□□□□ -1.74
ATG18	YFR021W	YGP1	P38616	354 aa	Known RBP	4.19	□□□□□ -1.74
ATG18	YFR021W	PFS2	P42841	465 aa	Known RBP	4.19	□□□□□ -1.74
ATG18	YFR021W	OST2	P46964	130 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	SBH2	P52871	88 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	YDC1	Q02896	317 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	AIM34	Q03673	198 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	ATG39	Q06159	398 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.19	□□□□□ -1.74
ATG18	YFR021W	NTE1	Q04958	1679 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	YIL177C	P40434	1758 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	YJL225C	P40889	1758 aa		4.19	□□□□□ -1.74
ATG18	YFR021W	RPO21	P04050	1733 aa	Known RBP	4.18	□□□□□ -1.74
ATG18	YFR021W	CMD1	P06787	147 aa	Known RBP	4.18	□□□□□ -1.74
ATG18	YFR021W	ADH3	P07246	375 aa	Known RBP	4.18	□□□□□ -1.74
ATG18	YFR021W	SEC14	P24280	304 aa	Known RBP	4.18	□□□□□ -1.74
ATG18	YFR021W	ECO1	P43605	281 aa		4.18	□□□□□ -1.74
ATG18	YFR021W	YDR249C	Q03787	373 aa		4.18	□□□□□ -1.74
ATG18	YFR021W	HPT1	Q04178	221 aa	Known RBP	4.18	□□□□□ -1.74
ATG18	YFR021W	YFR032C-B	Q8TGU2	87 aa		4.18	□□□□□ -1.74
ATG18	YFR021W	PET9	P18239	318 aa	Known RBP	4.17	□□□□□ -1.74
ATG18	YFR021W	FMP23	P38231	175 aa		4.17	□□□□□ -1.74
ATG18	YFR021W	ICE2	P40499	491 aa		4.17	□□□□□ -1.74
ATG18	YFR021W	ARP3	P47117	449 aa	Known RBP	4.17	□□□□□ -1.74
ATG18	YFR021W	ARO8	P53090	500 aa	Known RBP	4.17	□□□□□ -1.74
ATG18	YFR021W	DYN3	Q04949	312 aa		4.17	□□□□□ -1.74
ATG18	YFR021W	SHH4	Q06236	168 aa		4.17	□□□□□ -1.74
ATG18	YFR021W	SUE1	Q06524	206 aa		4.17	□□□□□ -1.74
ATG18	YFR021W	SCO1	P23833	295 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	YHR125W	P38831	101 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	PSF1	Q12488	208 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.16	□□□□□ -1.74
ATG18	YFR021W	HIS3	P06633	220 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	YLR156W	P0CE96	114 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	YLR159W	P0CE97	114 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	YLR161W	P0CE98	114 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	LDB16	P25587	256 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	TKL2	P33315	681 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	KDX1	P36005	433 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	SKG1	P36169	355 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	ARC15	P40518	154 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
ATG18	YFR021W	APJ1	P53940	528 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	HSK3	P69852	69 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	SWP1	Q02795	286 aa		4.16	□□□□□ -1.74
ATG18	YFR021W	MCP1	Q12106	302 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms