RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A YDR249CQ03787 373 aa1.13□□□□□ -2.23
YER088C-AYER088C-A HNT1Q04344 158 aaKnown RBP1.13□□□□□ -2.23
YER088C-AYER088C-A DGA1Q08650 418 aa1.13□□□□□ -2.23
YER088C-AYER088C-A VPS68Q12016 184 aa1.13□□□□□ -2.23
YER088C-AYER088C-A MCP1Q12106 302 aa1.13□□□□□ -2.23
YER088C-AYER088C-A RPS24AP0CX31 135 aaKnown RBP1.12□□□□□ -2.23
YER088C-AYER088C-A RPS24BP0CX32 135 aaKnown RBP1.12□□□□□ -2.23
YER088C-AYER088C-A RPB3P16370 318 aaKnown RBP1.12□□□□□ -2.23
YER088C-AYER088C-A SCO1P23833 295 aa1.12□□□□□ -2.23
YER088C-AYER088C-A SEC14P24280 304 aaKnown RBP1.12□□□□□ -2.23
YER088C-AYER088C-A YCR090CP25654 182 aaKnown RBP1.12□□□□□ -2.23
YER088C-AYER088C-A MDH3P32419 343 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
YER088C-AYER088C-A CLB6P32943 380 aa1.12□□□□□ -2.23
YER088C-AYER088C-A ECM4P36156 370 aa1.12□□□□□ -2.23
YER088C-AYER088C-A MRPL17P36528 281 aa1.12□□□□□ -2.23
YER088C-AYER088C-A ERV15P38312 142 aa1.12□□□□□ -2.23
YER088C-AYER088C-A YHR180WP38868 163 aa1.12□□□□□ -2.23
YER088C-AYER088C-A AVT2P39981 480 aa1.12□□□□□ -2.23
YER088C-AYER088C-A YER076CP40049 302 aa1.12□□□□□ -2.23
YER088C-AYER088C-A ERG10P41338 398 aaKnown RBP1.12□□□□□ -2.23
YER088C-AYER088C-A COS6P53344 381 aa1.12□□□□□ -2.23
YER088C-AYER088C-A YIP3P53633 176 aa1.12□□□□□ -2.23
YER088C-AYER088C-A YDR274CP87283 123 aa1.12□□□□□ -2.23
YER088C-AYER088C-A AIM34Q03673 198 aa1.12□□□□□ -2.23
YER088C-AYER088C-A MRPS8Q03799 155 aa1.12□□□□□ -2.23
YER088C-AYER088C-A GGA1Q06336 557 aa1.12□□□□□ -2.23
YER088C-AYER088C-A ARR2Q06597 130 aa1.12□□□□□ -2.23
YER088C-AYER088C-A EMC6Q12431 108 aa1.12□□□□□ -2.23
YER088C-AYER088C-A YDL085C-AQ3E7B7 68 aaKnown RBP1.12□□□□□ -2.23
YER088C-AYER088C-A YPR014CQ6B0W2 109 aa1.12□□□□□ -2.23
YER088C-AYER088C-A MET5P47169 1442 aa1.12□□□□□ -2.23
YER088C-AYER088C-A RPL35AP0CX84 120 aaKnown RBP1.11□□□□□ -2.23
YER088C-AYER088C-A RPL35BP0CX85 120 aaKnown RBP1.11□□□□□ -2.23
YER088C-AYER088C-A SEC17P32602 292 aa1.11□□□□□ -2.23
YER088C-AYER088C-A SNC2P33328 115 aa1.11□□□□□ -2.23
YER088C-AYER088C-A YET1P35723 206 aa1.11□□□□□ -2.23
YER088C-AYER088C-A YOR062CP36025 268 aa1.11□□□□□ -2.23
YER088C-AYER088C-A OPY1P38271 328 aa1.11□□□□□ -2.23
YER088C-AYER088C-A GVP36P40531 326 aaKnown RBP1.11□□□□□ -2.23
YER088C-AYER088C-A PRM10P42946 383 aa1.11□□□□□ -2.23
YER088C-AYER088C-A TMA22P47089 198 aaPredicted RBP1.11□□□□□ -2.23
YER088C-AYER088C-A ARP3P47117 449 aaKnown RBP1.11□□□□□ -2.23
YER088C-AYER088C-A ERG25P53045 309 aa1.11□□□□□ -2.23
YER088C-AYER088C-A ARO8P53090 500 aaKnown RBP1.11□□□□□ -2.23
YER088C-AYER088C-A YLR460CP54007 376 aa1.11□□□□□ -2.23
YER088C-AYER088C-A ARO80Q04052 950 aa1.11□□□□□ -2.23
YER088C-AYER088C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
YER088C-AYER088C-A YLR031WQ07978 186 aa1.11□□□□□ -2.23
YER088C-AYER088C-A RIO1Q12196 484 aaKnown RBP1.11□□□□□ -2.23
YER088C-AYER088C-A PEX11Q12462 236 aa1.11□□□□□ -2.23
YER088C-AYER088C-A QCR2P07257 368 aa1.1□□□□□ -2.23
YER088C-AYER088C-A CPA1P07258 411 aaKnown RBP1.1□□□□□ -2.23
YER088C-AYER088C-A ATP15P21306 62 aa1.1□□□□□ -2.23
YER088C-AYER088C-A CNB1P25296 175 aa1.1□□□□□ -2.23
YER088C-AYER088C-A PAN3P36102 679 aaPredicted RBP1.1□□□□□ -2.23
YER088C-AYER088C-A PHO88P38264 188 aaPredicted RBP1.1□□□□□ -2.23
YER088C-AYER088C-A YBR285WP38354 144 aa1.1□□□□□ -2.23
YER088C-AYER088C-A TVP23P38962 199 aa1.1□□□□□ -2.23
YER088C-AYER088C-A FCY21P40039 528 aa1.1□□□□□ -2.23
YER088C-AYER088C-A VTC1P40046 129 aaRIP-Chip data1.1□□□□□ -2.23not detected
YER088C-AYER088C-A ICE2P40499 491 aa1.1□□□□□ -2.23
YER088C-AYER088C-A YJL027CP47063 138 aaPredicted RBP1.1□□□□□ -2.23
YER088C-AYER088C-A YJR111CP47148 283 aaKnown RBP1.1□□□□□ -2.23
YER088C-AYER088C-A UBC12P52491 188 aa1.1□□□□□ -2.23
YER088C-AYER088C-A YNR077CP53758 84 aa1.1□□□□□ -2.23
YER088C-AYER088C-A SHH4Q06236 168 aa1.1□□□□□ -2.23
YER088C-AYER088C-A YOL014WQ08110 124 aa1.1□□□□□ -2.23
YER088C-AYER088C-A YOR283WQ12040 230 aaKnown RBP1.1□□□□□ -2.23
YER088C-AYER088C-A YOR342CQ12182 319 aa1.1□□□□□ -2.23
YER088C-AYER088C-A YML100W-AQ8TGT0 57 aa1.1□□□□□ -2.23
YER088C-AYER088C-A MEI4P29467 408 aa1.09□□□□□ -2.23
YER088C-AYER088C-A OCH1P31755 480 aa1.09□□□□□ -2.23
YER088C-AYER088C-A ARC19P33204 171 aaKnown RBP1.09□□□□□ -2.23
YER088C-AYER088C-A UMP1P38293 148 aa1.09□□□□□ -2.23
YER088C-AYER088C-A NVJ1P38881 321 aa1.09□□□□□ -2.23
YER088C-AYER088C-A LSM4P40070 187 aaKnown RBP1.09□□□□□ -2.23
YER088C-AYER088C-A AGE2P40529 298 aa1.09□□□□□ -2.23
YER088C-AYER088C-A YKE4P40544 346 aa1.09□□□□□ -2.23
YER088C-AYER088C-A TIR3P40552 269 aa1.09□□□□□ -2.23
YER088C-AYER088C-A SER2P42941 309 aa1.09□□□□□ -2.23
YER088C-AYER088C-A FMP32P43557 207 aa1.09□□□□□ -2.23
YER088C-AYER088C-A DAN1P47178 298 aa1.09□□□□□ -2.23
YER088C-AYER088C-A CYT2Q00873 224 aa1.09□□□□□ -2.23
YER088C-AYER088C-A NUP49Q02199 472 aa1.09□□□□□ -2.23
YER088C-AYER088C-A YMR295CQ03559 197 aa1.09□□□□□ -2.23
YER088C-AYER088C-A YHR086W-AQ3E746 53 aa1.09□□□□□ -2.23
YER088C-AYER088C-A CMD1P06787 147 aaKnown RBP1.08□□□□□ -2.24
YER088C-AYER088C-A NSP1P14907 823 aaKnown RBP1.08□□□□□ -2.24
YER088C-AYER088C-A SCL1P21243 252 aaKnown RBP1.08□□□□□ -2.24
YER088C-AYER088C-A MGT1P26188 188 aa1.08□□□□□ -2.24
YER088C-AYER088C-A YKR041WP36134 250 aa1.08□□□□□ -2.24
YER088C-AYER088C-A YHR022CP38763 256 aa1.08□□□□□ -2.24
YER088C-AYER088C-A MTW1P39731 289 aa1.08□□□□□ -2.24
YER088C-AYER088C-A YEA4P40004 342 aa1.08□□□□□ -2.24
YER088C-AYER088C-A YER121WP40076 114 aa1.08□□□□□ -2.24
YER088C-AYER088C-A YER134CP40081 178 aa1.08□□□□□ -2.24
YER088C-AYER088C-A YNL217WP40152 326 aa1.08□□□□□ -2.24
YER088C-AYER088C-A SKI6P46948 246 aaPredicted RBP1.08□□□□□ -2.24
YER088C-AYER088C-A DOC1P53068 250 aa1.08□□□□□ -2.24
YER088C-AYER088C-A JAC1P53193 184 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms