RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W RIM2P38127 377 aa1.3□□□□□ -2.2
SXM1YDR395W MBA1P38300 278 aa1.3□□□□□ -2.2
SXM1YDR395W LSM12P38828 187 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W YEA4P40004 342 aa1.3□□□□□ -2.2
SXM1YDR395W RRG9P40156 214 aa1.3□□□□□ -2.2
SXM1YDR395W HAC1P41546 238 aa1.3□□□□□ -2.2
SXM1YDR395W WWM1P43582 211 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W HMS2P47175 358 aa1.3□□□□□ -2.2
SXM1YDR395W BXI1P48558 297 aa1.3□□□□□ -2.2
SXM1YDR395W MRH4P53166 561 aa1.3□□□□□ -2.2
SXM1YDR395W YGL039WP53183 348 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W COG7P53195 279 aa1.3□□□□□ -2.2
SXM1YDR395W PCP1P53259 346 aa1.3□□□□□ -2.2
SXM1YDR395W SMM1P53720 384 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W FRE4P53746 719 aa1.3□□□□□ -2.2
SXM1YDR395W DIG2Q03373 323 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W YLR179CQ06252 201 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W MCH1Q07376 486 aa1.3□□□□□ -2.2
SXM1YDR395W THI20Q08224 551 aa1.3□□□□□ -2.2
SXM1YDR395W IRC13Q08630 104 aa1.3□□□□□ -2.2
SXM1YDR395W SCP1Q08873 200 aa1.3□□□□□ -2.2
SXM1YDR395W USV1Q12132 391 aa1.3□□□□□ -2.2
SXM1YDR395W YOR342CQ12182 319 aa1.3□□□□□ -2.2
SXM1YDR395W PEX11Q12462 236 aa1.3□□□□□ -2.2
SXM1YDR395W HTZ1Q12692 134 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W YPL119C-AQ3E751 87 aa1.3□□□□□ -2.2
SXM1YDR395W PDR18P53756 1333 aa1.3□□□□□ -2.2
SXM1YDR395W YKR104WP0CE69 306 aa1.3□□□□□ -2.2
SXM1YDR395W GLN3P18494 730 aa1.3□□□□□ -2.2
SXM1YDR395W PHO13P19881 312 aa1.3□□□□□ -2.2
SXM1YDR395W SPO13P23624 291 aa1.3□□□□□ -2.2
SXM1YDR395W SCO1P23833 295 aa1.3□□□□□ -2.2
SXM1YDR395W BUB2P26448 306 aaPredicted RBP1.3□□□□□ -2.2
SXM1YDR395W APS1P35181 156 aa1.3□□□□□ -2.2
SXM1YDR395W PMU1P36069 295 aa1.3□□□□□ -2.2
SXM1YDR395W PRY2P36110 329 aa1.3□□□□□ -2.2
SXM1YDR395W SCO2P38072 301 aa1.3□□□□□ -2.2
SXM1YDR395W CHL4P38907 458 aa1.3□□□□□ -2.2
SXM1YDR395W TIM17P39515 158 aa1.3□□□□□ -2.2
SXM1YDR395W XBP1P40489 647 aa1.3□□□□□ -2.2
SXM1YDR395W RRT5P43607 289 aa1.3□□□□□ -2.2
SXM1YDR395W YAE1P47118 141 aaPredicted RBP1.3□□□□□ -2.2
SXM1YDR395W RPS12P48589 143 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W SDT1P53078 280 aa1.3□□□□□ -2.2
SXM1YDR395W ORM1P53224 222 aa1.3□□□□□ -2.2
SXM1YDR395W YGR050CP53231 118 aa1.3□□□□□ -2.2
SXM1YDR395W PGA1P53896 198 aa1.3□□□□□ -2.2
SXM1YDR395W RNH201P53942 307 aa1.3□□□□□ -2.2
SXM1YDR395W CRZ1P53968 678 aa1.3□□□□□ -2.2
SXM1YDR395W YKR005CQ02203 525 aa1.3□□□□□ -2.2
SXM1YDR395W ODC1Q03028 310 aa1.3□□□□□ -2.2
SXM1YDR395W COF1Q03048 143 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W MAK3Q03503 176 aa1.3□□□□□ -2.2
SXM1YDR395W TMA23Q03525 211 aa1.3□□□□□ -2.2
SXM1YDR395W RAV2Q03956 351 aa1.3□□□□□ -2.2
SXM1YDR395W TAF9Q05027 157 aa1.3□□□□□ -2.2
SXM1YDR395W YOL073CQ08232 322 aa1.3□□□□□ -2.2
SXM1YDR395W YOR186WQ08560 144 aa1.3□□□□□ -2.2
SXM1YDR395W FRE8Q12209 686 aa1.3□□□□□ -2.2
SXM1YDR395W YDL180WQ12301 547 aa1.3□□□□□ -2.2
SXM1YDR395W MPD1Q12404 318 aaKnown RBP1.3□□□□□ -2.2
SXM1YDR395W PSF1Q12488 208 aa1.3□□□□□ -2.2
SXM1YDR395W SPS2P08459 502 aa1.29□□□□□ -2.2
SXM1YDR395W PHO85P17157 305 aa1.29□□□□□ -2.2
SXM1YDR395W STP22P25604 385 aa1.29□□□□□ -2.2
SXM1YDR395W PTC1P35182 281 aa1.29□□□□□ -2.2
SXM1YDR395W YRA2P36036 203 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
SXM1YDR395W PAN3P36102 679 aaPredicted RBP1.29□□□□□ -2.2
SXM1YDR395W NAT2P37293 288 aa1.29□□□□□ -2.2
SXM1YDR395W YMC2P38087 329 aa1.29□□□□□ -2.2
SXM1YDR395W AVT5P38176 459 aa1.29□□□□□ -2.2
SXM1YDR395W YBL081WP38180 368 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W YHK8P38776 514 aa1.29□□□□□ -2.2
SXM1YDR395W PET8P38921 284 aa1.29□□□□□ -2.2
SXM1YDR395W DLS1P40366 167 aa1.29□□□□□ -2.2
SXM1YDR395W PAN6P40459 309 aa1.29□□□□□ -2.2
SXM1YDR395W COS10P52924 374 aa1.29□□□□□ -2.2
SXM1YDR395W YGL101WP53144 215 aa1.29□□□□□ -2.2
SXM1YDR395W BOR1P53838 576 aa1.29□□□□□ -2.2
SXM1YDR395W SMX3P54999 86 aaPredicted RBP1.29□□□□□ -2.2
SXM1YDR395W YMR181CQ03231 154 aa1.29□□□□□ -2.2
SXM1YDR395W TDA1Q03533 586 aa1.29□□□□□ -2.2
SXM1YDR395W YML018CQ03730 393 aa1.29□□□□□ -2.2
SXM1YDR395W INM2Q05533 292 aa1.29□□□□□ -2.2
SXM1YDR395W RRS1Q08746 203 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W FSF1Q12029 327 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W YLR049CQ12110 428 aa1.29□□□□□ -2.2
SXM1YDR395W PRR2Q12310 699 aa1.29□□□□□ -2.2
SXM1YDR395W VAR1P02381 398 aa1.29□□□□□ -2.2
SXM1YDR395W RPL2AP0CX45 254 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W RPL2BP0CX46 254 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W YCR100CP25606 316 aa1.29□□□□□ -2.2
SXM1YDR395W GPX1P36014 167 aa1.29□□□□□ -2.2
SXM1YDR395W YBR056WP38081 501 aa1.29□□□□□ -2.2
SXM1YDR395W YPT31P38555 223 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W RPS20P38701 121 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W YNL200CP40165 246 aaKnown RBP1.29□□□□□ -2.2
SXM1YDR395W YPL073CP40323 161 aa1.29□□□□□ -2.2
SXM1YDR395W SKI6P46948 246 aaPredicted RBP1.29□□□□□ -2.2
SXM1YDR395W ARP3P47117 449 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 105.1 ms