RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C AIM25P47140 327 aa2.61□□□□□ -1.99
LSM6YDR378C GRX3Q03835 250 aa2.61□□□□□ -1.99
LSM6YDR378C GPM2Q12008 311 aa2.61□□□□□ -1.99
LSM6YDR378C RPL27AP0C2H6 136 aaKnown RBP2.6□□□□□ -1.99
LSM6YDR378C CKS1P20486 150 aaKnown RBP2.6□□□□□ -1.99
LSM6YDR378C YNR077CP53758 84 aa2.6□□□□□ -1.99
LSM6YDR378C FSF1Q12029 327 aaKnown RBP2.6□□□□□ -1.99
LSM6YDR378C MET5P47169 1442 aa2.59□□□□□ -1.99
LSM6YDR378C JIP3O13555 125 aa2.59□□□□□ -1.99
LSM6YDR378C SAY1P53324 424 aa2.59□□□□□ -1.99
LSM6YDR378C YDR274CP87283 123 aa2.59□□□□□ -1.99
LSM6YDR378C YCL012CQ8J0M4 134 aa2.59□□□□□ -1.99
LSM6YDR378C YBR219CP38317 127 aa2.58□□□□□ -2
LSM6YDR378C YBR285WP38354 144 aa2.58□□□□□ -2
LSM6YDR378C MMS2P53152 137 aa2.58□□□□□ -2
LSM6YDR378C YNG1Q08465 219 aa2.58□□□□□ -2
LSM6YDR378C FLO9P39712 1322 aa2.58□□□□□ -2
LSM6YDR378C GAA1P39012 614 aa2.57□□□□□ -2
LSM6YDR378C NOP19P53317 196 aaPredicted RBP2.57□□□□□ -2
LSM6YDR378C IKI3Q06706 1349 aaKnown RBP2.57□□□□□ -2
LSM6YDR378C YIL177CP40434 1758 aa2.56□□□□□ -2
LSM6YDR378C YJL225CP40889 1758 aa2.56□□□□□ -2
LSM6YDR378C QCR7P00128 127 aa2.56□□□□□ -2
LSM6YDR378C SIR2P06700 562 aa2.56□□□□□ -2
LSM6YDR378C YOL162WP0CF19 215 aa2.56□□□□□ -2
LSM6YDR378C ATP15P21306 62 aa2.56□□□□□ -2
LSM6YDR378C YBR209WP38311 105 aa2.56□□□□□ -2
LSM6YDR378C HNT1Q04344 158 aaKnown RBP2.56□□□□□ -2
LSM6YDR378C PDR18P53756 1333 aa2.56□□□□□ -2
LSM6YDR378C GLE2P40066 365 aa2.55□□□□□ -2
LSM6YDR378C YER135CP40082 130 aa2.55□□□□□ -2
LSM6YDR378C FUS2Q05670 677 aa2.55□□□□□ -2
LSM6YDR378C TFC1P32367 649 aa2.54□□□□□ -2
LSM6YDR378C SHE2P36068 246 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
LSM6YDR378C ATG40Q99325 256 aa2.54□□□□□ -2
LSM6YDR378C CPA1P07258 411 aaKnown RBP2.53□□□□□ -2
LSM6YDR378C MRS1P07266 363 aa2.53□□□□□ -2
LSM6YDR378C YPK2P18961 677 aa2.53□□□□□ -2
LSM6YDR378C YKR045CP36138 183 aa2.53□□□□□ -2
LSM6YDR378C GGA1Q06336 557 aa2.53□□□□□ -2
LSM6YDR378C ANT1Q06497 328 aa2.53□□□□□ -2
LSM6YDR378C CSI2Q08054 341 aa2.53□□□□□ -2
LSM6YDR378C RAD9P14737 1309 aa2.52□□□□□ -2.01
LSM6YDR378C YCR090CP25654 182 aaKnown RBP2.52□□□□□ -2.01
LSM6YDR378C TMA19P35691 167 aaKnown RBP2.52□□□□□ -2.01
LSM6YDR378C AIM2P39721 246 aa2.52□□□□□ -2.01
LSM6YDR378C MBF1O14467 151 aaKnown RBP2.51□□□□□ -2.01
LSM6YDR378C CNB1P25296 175 aa2.51□□□□□ -2.01
LSM6YDR378C ASF2P32448 525 aaPredicted RBP2.51□□□□□ -2.01
LSM6YDR378C ERG10P41338 398 aaKnown RBP2.51□□□□□ -2.01
LSM6YDR378C ERJ5P43613 295 aaPredicted RBP2.51□□□□□ -2.01
LSM6YDR378C YLR162WQ06235 118 aa2.51□□□□□ -2.01
LSM6YDR378C YLR236CA0A023PZG4 107 aa2.5□□□□□ -2.01
LSM6YDR378C YGL010WP25338 174 aa2.5□□□□□ -2.01
LSM6YDR378C KDX1P36005 433 aa2.49□□□□□ -2.01
LSM6YDR378C POP3P53833 195 aaPredicted RBP2.49□□□□□ -2.01
LSM6YDR378C RIO1Q12196 484 aaKnown RBP2.49□□□□□ -2.01
LSM6YDR378C ODC2Q99297 307 aa2.49□□□□□ -2.01
LSM6YDR378C IGO2Q9P305 131 aa2.49□□□□□ -2.01
LSM6YDR378C YBR220CP38318 560 aa2.48□□□□□ -2.01
LSM6YDR378C RPL13BP40212 199 aaKnown RBP2.48□□□□□ -2.01
LSM6YDR378C KNH1P50112 268 aa2.48□□□□□ -2.01
LSM6YDR378C GIM3P53900 129 aa2.48□□□□□ -2.01
LSM6YDR378C CUE4Q04201 117 aaPredicted RBP2.48□□□□□ -2.01
LSM6YDR378C RPL13AQ12690 199 aaPredicted RBP2.48□□□□□ -2.01
LSM6YDR378C OCH1P31755 480 aa2.47□□□□□ -2.01
LSM6YDR378C RTC4P53850 401 aa2.47□□□□□ -2.01
LSM6YDR378C OPY1P38271 328 aa2.46□□□□□ -2.02
LSM6YDR378C PDS1P40316 373 aaPredicted RBP2.46□□□□□ -2.02
LSM6YDR378C DGA1Q08650 418 aa2.46□□□□□ -2.02
LSM6YDR378C POR1P04840 283 aaKnown RBP2.45□□□□□ -2.02
LSM6YDR378C GPA2P10823 449 aa2.45□□□□□ -2.02
LSM6YDR378C PAN3P36102 679 aaPredicted RBP2.45□□□□□ -2.02
LSM6YDR378C CAF4P36130 643 aa2.45□□□□□ -2.02
LSM6YDR378C TVP23P38962 199 aa2.45□□□□□ -2.02
LSM6YDR378C YEA4P40004 342 aa2.45□□□□□ -2.02
LSM6YDR378C SKI6P46948 246 aaPredicted RBP2.45□□□□□ -2.02
LSM6YDR378C ARP3P47117 449 aaKnown RBP2.45□□□□□ -2.02
LSM6YDR378C NUP49Q02199 472 aa2.45□□□□□ -2.02
LSM6YDR378C YLR031WQ07978 186 aa2.45□□□□□ -2.02
LSM6YDR378C RAD28Q12021 506 aa2.45□□□□□ -2.02
LSM6YDR378C YDL180WQ12301 547 aa2.45□□□□□ -2.02
LSM6YDR378C QCR8P08525 94 aa2.44□□□□□ -2.02
LSM6YDR378C SNF4P12904 322 aa2.44□□□□□ -2.02
LSM6YDR378C FPR1P20081 114 aaKnown RBP2.44□□□□□ -2.02
LSM6YDR378C SER2P42941 309 aa2.44□□□□□ -2.02
LSM6YDR378C YNL184CP53876 108 aa2.44□□□□□ -2.02
LSM6YDR378C DYN3Q04949 312 aa2.44□□□□□ -2.02
LSM6YDR378C RPL2AP0CX45 254 aaKnown RBP2.43□□□□□ -2.02
LSM6YDR378C RPL2BP0CX46 254 aaKnown RBP2.43□□□□□ -2.02
LSM6YDR378C APA2P22108 325 aa2.43□□□□□ -2.02
LSM6YDR378C UPS2P35200 230 aa2.43□□□□□ -2.02
LSM6YDR378C YER134CP40081 178 aa2.43□□□□□ -2.02
LSM6YDR378C ARO8P53090 500 aaKnown RBP2.43□□□□□ -2.02
LSM6YDR378C HOP2P53187 214 aa2.43□□□□□ -2.02
LSM6YDR378C ARO80Q04052 950 aa2.43□□□□□ -2.02
LSM6YDR378C YLR036CQ07986 203 aa2.43□□□□□ -2.02
LSM6YDR378C YOL024WQ08172 172 aa2.43□□□□□ -2.02
LSM6YDR378C SEC11P15367 167 aa2.42□□□□□ -2.02
LSM6YDR378C TAH1P25638 111 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms