RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YCL012CQ8J0M4 134 aa1.7□□□□□ -2.14
SIR4YDR227W CPR1P14832 162 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W MCK1P21965 375 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W NUP2P32499 720 aa1.7□□□□□ -2.14
SIR4YDR227W NUF2P33895 451 aa1.7□□□□□ -2.14
SIR4YDR227W SKG1P36169 355 aa1.7□□□□□ -2.14
SIR4YDR227W RGI1P40043 161 aaPredicted RBP1.7□□□□□ -2.14
SIR4YDR227W YER137CP40083 148 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W KEG1P43614 200 aa1.7□□□□□ -2.14
SIR4YDR227W GPI14P47088 403 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W MRX11Q03079 207 aa1.7□□□□□ -2.14
SIR4YDR227W NCE102Q12207 173 aaRIP-Chip data1.7□□□□□ -2.14not detected
SIR4YDR227W YCR024C-BQ3E7Z8 88 aa1.7□□□□□ -2.14
SIR4YDR227W ECM33P38248 429 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W RPE1P46969 238 aa1.7□□□□□ -2.14
SIR4YDR227W CIS3P47001 227 aa1.7□□□□□ -2.14
SIR4YDR227W BIO4P53630 237 aa1.7□□□□□ -2.14
SIR4YDR227W WSC2P53832 503 aa1.7□□□□□ -2.14
SIR4YDR227W TMA20P89886 181 aaPredicted RBP1.7□□□□□ -2.14
SIR4YDR227W ARL3Q02804 198 aa1.7□□□□□ -2.14
SIR4YDR227W YDR115WQ04598 105 aa1.7□□□□□ -2.14
SIR4YDR227W FSH2Q05015 223 aa1.7□□□□□ -2.14
SIR4YDR227W HRD1Q08109 551 aa1.7□□□□□ -2.14
SIR4YDR227W AIM39Q08223 395 aa1.7□□□□□ -2.14
SIR4YDR227W YCT1Q12235 531 aa1.7□□□□□ -2.14
SIR4YDR227W TY1A-NL1Q12391 440 aaKnown RBP1.7□□□□□ -2.14
SIR4YDR227W YPR014CQ6B0W2 109 aa1.7□□□□□ -2.14
SIR4YDR227W TIR1P10863 254 aa1.69□□□□□ -2.14
SIR4YDR227W MAK32P23060 363 aa1.69□□□□□ -2.14
SIR4YDR227W HES1P35843 434 aa1.69□□□□□ -2.14
SIR4YDR227W PHO89P38361 574 aa1.69□□□□□ -2.14
SIR4YDR227W AIM2P39721 246 aa1.69□□□□□ -2.14
SIR4YDR227W YLR112WQ12130 139 aa1.69□□□□□ -2.14
SIR4YDR227W RPL31AP0C2H8 113 aaKnown RBP1.69□□□□□ -2.14
SIR4YDR227W MSS1P32559 526 aaPredicted RBP1.69□□□□□ -2.14
SIR4YDR227W SCM4P32564 187 aa1.69□□□□□ -2.14
SIR4YDR227W MDM31P38880 579 aa1.69□□□□□ -2.14
SIR4YDR227W GWT1P47026 490 aa1.69□□□□□ -2.14
SIR4YDR227W CRZ1P53968 678 aa1.69□□□□□ -2.14
SIR4YDR227W EMI1Q04406 187 aa1.69□□□□□ -2.14
SIR4YDR227W YAP7Q08182 245 aa1.69□□□□□ -2.14
SIR4YDR227W MRX4Q12467 430 aa1.69□□□□□ -2.14
SIR4YDR227W TRP4P07285 380 aaPredicted RBP1.69□□□□□ -2.14
SIR4YDR227W CAP2P13517 287 aa1.69□□□□□ -2.14
SIR4YDR227W NMT1P14743 455 aa1.69□□□□□ -2.14
SIR4YDR227W TIR2P33890 251 aa1.69□□□□□ -2.14
SIR4YDR227W LAG1P38703 411 aa1.69□□□□□ -2.14
SIR4YDR227W GGC1P38988 300 aa1.69□□□□□ -2.14
SIR4YDR227W SMB1P40018 196 aaKnown RBP1.69□□□□□ -2.14
SIR4YDR227W MST27P53176 234 aa1.69□□□□□ -2.14
SIR4YDR227W SWT21P53873 357 aaPredicted RBP1.69□□□□□ -2.14
SIR4YDR227W YNL046WP53956 172 aa1.69□□□□□ -2.14
SIR4YDR227W GPI15P53961 229 aa1.69□□□□□ -2.14
SIR4YDR227W PST2Q12335 198 aaKnown RBP1.69□□□□□ -2.14
SIR4YDR227W FOL3Q12676 427 aaPredicted RBP1.69□□□□□ -2.14
SIR4YDR227W MDM10P18409 493 aa1.68□□□□□ -2.14
SIR4YDR227W CKS1P20486 150 aaKnown RBP1.68□□□□□ -2.14
SIR4YDR227W SRP21P32342 167 aa1.68□□□□□ -2.14
SIR4YDR227W AIM18P38884 321 aa1.68□□□□□ -2.14
SIR4YDR227W CAT5P41735 233 aa1.68□□□□□ -2.14
SIR4YDR227W YJR011CP47086 261 aaPredicted RBP1.68□□□□□ -2.14
SIR4YDR227W YPL077CQ02831 240 aa1.68□□□□□ -2.14
SIR4YDR227W VBA1Q04301 562 aa1.68□□□□□ -2.14
SIR4YDR227W SHH4Q06236 168 aa1.68□□□□□ -2.14
SIR4YDR227W YDL009CQ12210 107 aa1.68□□□□□ -2.14
SIR4YDR227W PST1Q12355 444 aa1.68□□□□□ -2.14
SIR4YDR227W ISD11Q6Q560 94 aa1.68□□□□□ -2.14
SIR4YDR227W SCEIP03882 235 aa1.68□□□□□ -2.14
SIR4YDR227W SEC59P20048 519 aa1.68□□□□□ -2.14
SIR4YDR227W YBL010CP32788 280 aa1.68□□□□□ -2.14
SIR4YDR227W NTF2P33331 125 aaKnown RBP1.68□□□□□ -2.14
SIR4YDR227W BUD13P46947 266 aaPredicted RBP1.68□□□□□ -2.14
SIR4YDR227W FRQ1Q06389 190 aa1.68□□□□□ -2.14
SIR4YDR227W SPC3Q12133 184 aa1.68□□□□□ -2.14
SIR4YDR227W MHT1Q12525 324 aa1.68□□□□□ -2.14
SIR4YDR227W TDA8Q6B2U8 126 aa1.68□□□□□ -2.14
SIR4YDR227W UTP20P35194 2493 aaKnown RBP1.68□□□□□ -2.14
SIR4YDR227W DOG2P38773 246 aa1.68□□□□□ -2.14
SIR4YDR227W DOG1P38774 246 aa1.68□□□□□ -2.14
SIR4YDR227W GAA1P39012 614 aa1.68□□□□□ -2.14
SIR4YDR227W TOS2P50078 622 aa1.68□□□□□ -2.14
SIR4YDR227W AIM11P87275 137 aa1.68□□□□□ -2.14
SIR4YDR227W NEJ1Q06148 342 aa1.68□□□□□ -2.14
SIR4YDR227W PEX30Q06169 523 aa1.68□□□□□ -2.14
SIR4YDR227W ARR3Q06598 404 aa1.68□□□□□ -2.14
SIR4YDR227W AIM45Q12480 344 aaKnown RBP1.68□□□□□ -2.14
SIR4YDR227W YNL277W-AQ3E7Z0 62 aa1.68□□□□□ -2.14
SIR4YDR227W CHL4P38907 458 aa1.67□□□□□ -2.14
SIR4YDR227W SHO1P40073 367 aa1.67□□□□□ -2.14
SIR4YDR227W PRM5P40476 318 aa1.67□□□□□ -2.14
SIR4YDR227W MGA1P53050 456 aa1.67□□□□□ -2.14
SIR4YDR227W YGL230CP53074 147 aa1.67□□□□□ -2.14
SIR4YDR227W DYN2Q02647 92 aa1.67□□□□□ -2.14
SIR4YDR227W CGI121Q03705 181 aaKnown RBP1.67□□□□□ -2.14
SIR4YDR227W GPI17Q04080 534 aa1.67□□□□□ -2.14
SIR4YDR227W FEX1Q08913 375 aa1.67□□□□□ -2.14
SIR4YDR227W FEX2Q08991 375 aa1.67□□□□□ -2.14
SIR4YDR227W BEM2P39960 2167 aaKnown RBP1.67□□□□□ -2.14
SIR4YDR227W YHR214C-DP0CX93 97 aa1.67□□□□□ -2.14
SIR4YDR227W MSI1P13712 422 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 156.6 ms