RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C YMR007WQ03675 126 aa1.38□□□□□ -2.19
YDR034C-CYDR034C-C YFR032C-BQ8TGU2 87 aa1.38□□□□□ -2.19
YDR034C-CYDR034C-C RPB3P16370 318 aaKnown RBP1.37□□□□□ -2.19
YDR034C-CYDR034C-C CKS1P20486 150 aaKnown RBP1.37□□□□□ -2.19
YDR034C-CYDR034C-C PRX1P34227 261 aaKnown RBP1.37□□□□□ -2.19
YDR034C-CYDR034C-C ERG28P40030 148 aa1.37□□□□□ -2.19
YDR034C-CYDR034C-C IRC18P47056 224 aa1.37□□□□□ -2.19
YDR034C-CYDR034C-C ARO8P53090 500 aaKnown RBP1.37□□□□□ -2.19
YDR034C-CYDR034C-C PDR17P53844 350 aa1.37□□□□□ -2.19
YDR034C-CYDR034C-C YKL183C-AQ3E765 70 aa1.37□□□□□ -2.19
YDR034C-CYDR034C-C SEC4P07560 215 aaKnown RBP1.36□□□□□ -2.19
YDR034C-CYDR034C-C MAG1P22134 296 aaKnown RBP1.36□□□□□ -2.19
YDR034C-CYDR034C-C PBN1P25580 416 aa1.36□□□□□ -2.19
YDR034C-CYDR034C-C OTU1P43558 301 aa1.36□□□□□ -2.19
YDR034C-CYDR034C-C STE18P18852 110 aa1.35□□□□□ -2.19
YDR034C-CYDR034C-C TRM5P38793 499 aa1.35□□□□□ -2.19
YDR034C-CYDR034C-C EDC3P39998 551 aaKnown RBP1.35□□□□□ -2.19
YDR034C-CYDR034C-C YNL194CP40169 301 aa1.35□□□□□ -2.19
YDR034C-CYDR034C-C MGA1P53050 456 aa1.35□□□□□ -2.19
YDR034C-CYDR034C-C MDM32Q12171 622 aa1.35□□□□□ -2.19
YDR034C-CYDR034C-C ATP15P21306 62 aa1.34□□□□□ -2.2
YDR034C-CYDR034C-C CBT1P36038 271 aaPredicted RBP1.34□□□□□ -2.2
YDR034C-CYDR034C-C ECM4P36156 370 aa1.34□□□□□ -2.2
YDR034C-CYDR034C-C TVP23P38962 199 aa1.34□□□□□ -2.2
YDR034C-CYDR034C-C YEL067CP39978 195 aa1.34□□□□□ -2.2
YDR034C-CYDR034C-C SOK1P40317 901 aa1.34□□□□□ -2.2
YDR034C-CYDR034C-C FLX1P40464 311 aa1.34□□□□□ -2.2
YDR034C-CYDR034C-C LSM7P53905 115 aaKnown RBP1.34□□□□□ -2.2
YDR034C-CYDR034C-C NCB2Q92317 146 aa1.34□□□□□ -2.2
YDR034C-CYDR034C-C RPL27AP0C2H6 136 aaKnown RBP1.33□□□□□ -2.2
YDR034C-CYDR034C-C PRP18P33411 251 aaPredicted RBP1.33□□□□□ -2.2
YDR034C-CYDR034C-C YAE1P47118 141 aaPredicted RBP1.33□□□□□ -2.2
YDR034C-CYDR034C-C COG5P53951 403 aa1.33□□□□□ -2.2
YDR034C-CYDR034C-C IKI3Q06706 1349 aaKnown RBP1.32□□□□□ -2.2
YDR034C-CYDR034C-C RAD17P48581 401 aa1.32□□□□□ -2.2
YDR034C-CYDR034C-C YPR174CQ06616 221 aaPredicted RBP1.32□□□□□ -2.2
YDR034C-CYDR034C-C NSP1P14907 823 aaKnown RBP1.31□□□□□ -2.2
YDR034C-CYDR034C-C COQ1P18900 473 aa1.31□□□□□ -2.2
YDR034C-CYDR034C-C KDX1P36005 433 aa1.31□□□□□ -2.2
YDR034C-CYDR034C-C YER034WP40022 185 aaKnown RBP1.31□□□□□ -2.2
YDR034C-CYDR034C-C HMF1P40037 129 aaKnown RBP1.31□□□□□ -2.2
YDR034C-CYDR034C-C CWC27Q02770 301 aa1.31□□□□□ -2.2
YDR034C-CYDR034C-C PET191Q02772 108 aa1.31□□□□□ -2.2
YDR034C-CYDR034C-C AQY2P0CD90 149 aa1.3□□□□□ -2.2
YDR034C-CYDR034C-C MER1P16523 270 aa1.3□□□□□ -2.2
YDR034C-CYDR034C-C VMA22P38784 181 aa1.3□□□□□ -2.2
YDR034C-CYDR034C-C YPL073CP40323 161 aa1.3□□□□□ -2.2
YDR034C-CYDR034C-C HNT1Q04344 158 aaKnown RBP1.3□□□□□ -2.2
YDR034C-CYDR034C-C YDR157WA0A023PZE8 133 aa1.29□□□□□ -2.2
YDR034C-CYDR034C-C HUA1P40325 198 aa1.29□□□□□ -2.2
YDR034C-CYDR034C-C YOL160WQ08321 113 aa1.29□□□□□ -2.2
YDR034C-CYDR034C-C ODC2Q99297 307 aa1.29□□□□□ -2.2
YDR034C-CYDR034C-C FAS1P07149 2051 aaKnown RBP1.28□□□□□ -2.2
YDR034C-CYDR034C-C MDM35O60200 86 aa1.28□□□□□ -2.2
YDR034C-CYDR034C-C SPS18P32572 300 aa1.28□□□□□ -2.2
YDR034C-CYDR034C-C YHL042WP38729 150 aa1.28□□□□□ -2.2
YDR034C-CYDR034C-C MSS2P40990 351 aa1.28□□□□□ -2.2
YDR034C-CYDR034C-C CWC23P52868 283 aaPredicted RBP1.28□□□□□ -2.2
YDR034C-CYDR034C-C YNL247WP53852 767 aaKnown RBP1.28□□□□□ -2.2
YDR034C-CYDR034C-C CDC33P07260 213 aaKnown RBP1.27□□□□□ -2.21
YDR034C-CYDR034C-C YHR212W-AP0CX91 67 aa1.27□□□□□ -2.21
YDR034C-CYDR034C-C SPO13P23624 291 aa1.27□□□□□ -2.21
YDR034C-CYDR034C-C GET1P53192 235 aa1.27□□□□□ -2.21
YDR034C-CYDR034C-C YNG1Q08465 219 aa1.27□□□□□ -2.21
YDR034C-CYDR034C-C DGA1Q08650 418 aa1.27□□□□□ -2.21
YDR034C-CYDR034C-C SLH1P53327 1967 aaKnown RBP1.27□□□□□ -2.21
YDR034C-CYDR034C-C YCR090CP25654 182 aaKnown RBP1.26□□□□□ -2.21
YDR034C-CYDR034C-C YCR087C-AP37263 153 aa1.26□□□□□ -2.21
YDR034C-CYDR034C-C HYR1P40581 163 aaKnown RBP1.26□□□□□ -2.21
YDR034C-CYDR034C-C YFL065CP43539 102 aa1.26□□□□□ -2.21
YDR034C-CYDR034C-C AIM25P47140 327 aa1.26□□□□□ -2.21
YDR034C-CYDR034C-C RPL37BP51402 88 aaKnown RBP1.26□□□□□ -2.21
YDR034C-CYDR034C-C MPC3P53311 146 aa1.26□□□□□ -2.21
YDR034C-CYDR034C-C POR1P04840 283 aaKnown RBP1.25□□□□□ -2.21
YDR034C-CYDR034C-C PAN3P36102 679 aaPredicted RBP1.25□□□□□ -2.21
YDR034C-CYDR034C-C AIM2P39721 246 aa1.25□□□□□ -2.21
YDR034C-CYDR034C-C FUS2Q05670 677 aa1.25□□□□□ -2.21
YDR034C-CYDR034C-C YRA1Q12159 226 aaKnown RBP1.25□□□□□ -2.21
YDR034C-CYDR034C-C RUD3Q12234 484 aaKnown RBP1.25□□□□□ -2.21
YDR034C-CYDR034C-C IKI1P38874 309 aa1.24□□□□□ -2.21
YDR034C-CYDR034C-C GCN20P43535 752 aaKnown RBP1.24□□□□□ -2.21
YDR034C-CYDR034C-C CDC36P06100 191 aaPredicted RBP1.23□□□□□ -2.21
YDR034C-CYDR034C-C OCH1P31755 480 aa1.23□□□□□ -2.21
YDR034C-CYDR034C-C YFH7P43591 353 aa1.23□□□□□ -2.21
YDR034C-CYDR034C-C BNA7Q04066 261 aa1.23□□□□□ -2.21
YDR034C-CYDR034C-C YMR295CQ03559 197 aa1.22□□□□□ -2.21
YDR034C-CYDR034C-C YER188C-AP0C0V2 99 aa1.21□□□□□ -2.22
YDR034C-CYDR034C-C TAF14P35189 244 aa1.2□□□□□ -2.22
YDR034C-CYDR034C-C YEA4P40004 342 aa1.2□□□□□ -2.22
YDR034C-CYDR034C-C ERG10P41338 398 aaKnown RBP1.2□□□□□ -2.22
YDR034C-CYDR034C-C PGA2P53903 129 aa1.2□□□□□ -2.22
YDR034C-CYDR034C-C DYN3Q04949 312 aa1.2□□□□□ -2.22
YDR034C-CYDR034C-C PRP11Q07350 266 aaPredicted RBP1.2□□□□□ -2.22
YDR034C-CYDR034C-C YPK2P18961 677 aa1.19□□□□□ -2.22
YDR034C-CYDR034C-C YMR252CQ04814 134 aa1.19□□□□□ -2.22
YDR034C-CYDR034C-C IRC23Q08416 157 aa1.19□□□□□ -2.22
YDR034C-CYDR034C-C STP22P25604 385 aa1.18□□□□□ -2.22
YDR034C-CYDR034C-C RFA3P26755 122 aaKnown RBP1.18□□□□□ -2.22
YDR034C-CYDR034C-C YER134CP40081 178 aa1.18□□□□□ -2.22
YDR034C-CYDR034C-C DAD4P69851 72 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms