RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C PET9P18239 318 aaKnown RBP2.34□□□□□ -2.03
RRP42YDL111C CLG1P35190 452 aa2.34□□□□□ -2.03
RRP42YDL111C DSK2P48510 373 aa2.34□□□□□ -2.03
RRP42YDL111C YMR315WQ04869 349 aaKnown RBP2.34□□□□□ -2.03
RRP42YDL111C SPA2P23201 1466 aaKnown RBP2.33□□□□□ -2.04
RRP42YDL111C CKS1P20486 150 aaKnown RBP2.33□□□□□ -2.04
RRP42YDL111C YKR041WP36134 250 aa2.33□□□□□ -2.04
RRP42YDL111C LSM4P40070 187 aaKnown RBP2.33□□□□□ -2.04
RRP42YDL111C SKI6P46948 246 aaPredicted RBP2.33□□□□□ -2.04
RRP42YDL111C MNN5P46982 586 aa2.33□□□□□ -2.04
RRP42YDL111C ARP3P47117 449 aaKnown RBP2.33□□□□□ -2.04
RRP42YDL111C AIF1P52923 378 aa2.33□□□□□ -2.04
RRP42YDL111C HNT1Q04344 158 aaKnown RBP2.33□□□□□ -2.04
RRP42YDL111C NEJ1Q06148 342 aa2.33□□□□□ -2.04
RRP42YDL111C YLR050CQ12155 161 aaKnown RBP2.33□□□□□ -2.04
RRP42YDL111C MHT1Q12525 324 aa2.33□□□□□ -2.04
RRP42YDL111C QCR2P07257 368 aa2.32□□□□□ -2.04
RRP42YDL111C MRPS28P21771 286 aa2.32□□□□□ -2.04
RRP42YDL111C MEI4P29467 408 aa2.32□□□□□ -2.04
RRP42YDL111C ARO7P32178 256 aa2.32□□□□□ -2.04
RRP42YDL111C CLB6P32943 380 aa2.32□□□□□ -2.04
RRP42YDL111C MRPL17P36528 281 aa2.32□□□□□ -2.04
RRP42YDL111C AIM2P39721 246 aa2.32□□□□□ -2.04
RRP42YDL111C YER121WP40076 114 aa2.32□□□□□ -2.04
RRP42YDL111C ICE2P40499 491 aa2.32□□□□□ -2.04
RRP42YDL111C PRM10P42946 383 aa2.32□□□□□ -2.04
RRP42YDL111C COS6P53344 381 aa2.32□□□□□ -2.04
RRP42YDL111C HPT1Q04178 221 aaKnown RBP2.32□□□□□ -2.04
RRP42YDL111C SUE1Q06524 206 aa2.32□□□□□ -2.04
RRP42YDL111C YOR283WQ12040 230 aaKnown RBP2.32□□□□□ -2.04
RRP42YDL111C TIM9O74700 87 aa2.31□□□□□ -2.04
RRP42YDL111C AHC2P25649 128 aa2.31□□□□□ -2.04
RRP42YDL111C FMP23P38231 175 aa2.31□□□□□ -2.04
RRP42YDL111C UMP1P38293 148 aa2.31□□□□□ -2.04
RRP42YDL111C NVJ1P38881 321 aa2.31□□□□□ -2.04
RRP42YDL111C PGD1P40356 397 aa2.31□□□□□ -2.04
RRP42YDL111C TMA22P47089 198 aaPredicted RBP2.31□□□□□ -2.04
RRP42YDL111C YJR146WP47174 117 aa2.31□□□□□ -2.04
RRP42YDL111C ARO8P53090 500 aaKnown RBP2.31□□□□□ -2.04
RRP42YDL111C AIM34Q03673 198 aa2.31□□□□□ -2.04
RRP42YDL111C VPS68Q12016 184 aa2.31□□□□□ -2.04
RRP42YDL111C RPS24AP0CX31 135 aaKnown RBP2.3□□□□□ -2.04
RRP42YDL111C RPS24BP0CX32 135 aaKnown RBP2.3□□□□□ -2.04
RRP42YDL111C ATP15P21306 62 aa2.3□□□□□ -2.04
RRP42YDL111C SEC14P24280 304 aaKnown RBP2.3□□□□□ -2.04
RRP42YDL111C YCR090CP25654 182 aaKnown RBP2.3□□□□□ -2.04
RRP42YDL111C OCH1P31755 480 aa2.3□□□□□ -2.04
RRP42YDL111C MDH3P32419 343 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
RRP42YDL111C SNC2P33328 115 aa2.3□□□□□ -2.04
RRP42YDL111C AME1P38313 324 aa2.3□□□□□ -2.04
RRP42YDL111C MTW1P39731 289 aa2.3□□□□□ -2.04
RRP42YDL111C YER076CP40049 302 aa2.3□□□□□ -2.04
RRP42YDL111C GVP36P40531 326 aaKnown RBP2.3□□□□□ -2.04
RRP42YDL111C YGR219WP53307 113 aa2.3□□□□□ -2.04
RRP42YDL111C PGA1P53896 198 aa2.3□□□□□ -2.04
RRP42YDL111C SLM2P53955 656 aa2.3□□□□□ -2.04
RRP42YDL111C NUP49Q02199 472 aa2.3□□□□□ -2.04
RRP42YDL111C PLP1Q04004 230 aa2.3□□□□□ -2.04
RRP42YDL111C SHH4Q06236 168 aa2.3□□□□□ -2.04
RRP42YDL111C BRX1Q08235 291 aaKnown RBP2.3□□□□□ -2.04
RRP42YDL111C DGA1Q08650 418 aa2.3□□□□□ -2.04
RRP42YDL111C MPD1Q12404 318 aaKnown RBP2.3□□□□□ -2.04
RRP42YDL111C YPR014CQ6B0W2 109 aa2.3□□□□□ -2.04
RRP42YDL111C YIL177CP40434 1758 aa2.3□□□□□ -2.04
RRP42YDL111C YJL225CP40889 1758 aa2.3□□□□□ -2.04
RRP42YDL111C SSN2P38931 1420 aa2.29□□□□□ -2.04
RRP42YDL111C UBC6P33296 250 aaPredicted RBP2.29□□□□□ -2.04
RRP42YDL111C YHR180WP38868 163 aa2.29□□□□□ -2.04
RRP42YDL111C YKE4P40544 346 aa2.29□□□□□ -2.04
RRP42YDL111C TDA4P47153 279 aa2.29□□□□□ -2.04
RRP42YDL111C DYN3Q04949 312 aa2.29□□□□□ -2.04
RRP42YDL111C EMC6Q12431 108 aa2.29□□□□□ -2.04
RRP42YDL111C ODC2Q99297 307 aa2.29□□□□□ -2.04
RRP42YDL111C CMD1P06787 147 aaKnown RBP2.28□□□□□ -2.04
RRP42YDL111C TVP38P36164 337 aa2.28□□□□□ -2.04
RRP42YDL111C SER2P42941 309 aa2.28□□□□□ -2.04
RRP42YDL111C DAD3P69850 94 aa2.28□□□□□ -2.04
RRP42YDL111C GPI17Q04080 534 aa2.28□□□□□ -2.04
RRP42YDL111C SPG3Q04398 127 aaPredicted RBP2.28□□□□□ -2.04
RRP42YDL111C RDS3Q06835 107 aaPredicted RBP2.28□□□□□ -2.04
RRP42YDL111C HRT1Q08273 121 aa2.28□□□□□ -2.04
RRP42YDL111C YLR053CQ12026 108 aa2.28□□□□□ -2.04
RRP42YDL111C ATO3Q12359 275 aa2.28□□□□□ -2.04
RRP42YDL111C PEX11Q12462 236 aa2.28□□□□□ -2.04
RRP42YDL111C CPA1P07258 411 aaKnown RBP2.27□□□□□ -2.05
RRP42YDL111C YKL102CP34249 101 aa2.27□□□□□ -2.05
RRP42YDL111C YBR285WP38354 144 aa2.27□□□□□ -2.05
RRP42YDL111C YEA4P40004 342 aa2.27□□□□□ -2.05
RRP42YDL111C YER134CP40081 178 aa2.27□□□□□ -2.05
RRP42YDL111C CIS3P47001 227 aa2.27□□□□□ -2.05
RRP42YDL111C YJR111CP47148 283 aaKnown RBP2.27□□□□□ -2.05
RRP42YDL111C DOC1P53068 250 aa2.27□□□□□ -2.05
RRP42YDL111C YET1P35723 206 aa2.26□□□□□ -2.05
RRP42YDL111C YOR062CP36025 268 aa2.26□□□□□ -2.05
RRP42YDL111C SHE2P36068 246 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RRP42YDL111C OPY1P38271 328 aa2.26□□□□□ -2.05
RRP42YDL111C ERV15P38312 142 aa2.26□□□□□ -2.05
RRP42YDL111C RPL33BP41056 107 aaKnown RBP2.26□□□□□ -2.05
RRP42YDL111C YNR062CP53748 327 aa2.26□□□□□ -2.05
RRP42YDL111C YDR274CP87283 123 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms