RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	YCL001W-A	P87012	153 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	VPS28	Q02767	242 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	SNO1	Q03144	224 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	SDC1	Q03323	175 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	YDR387C	Q04162	555 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	FIT1	Q04433	528 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	HRI1	Q05905	244 aa	Known RBP	3.15	□□□□□ -1.91
TRX3	YCR083W	YLR456W	Q06199	204 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	DXO1	Q06349	442 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	YPD1	Q07688	167 aa		3.15	□□□□□ -1.91
TRX3	YCR083W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
TRX3	YCR083W	COX5B	P00425	151 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	YFR010W-A	P0C5N0	62 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	MAK32	P23060	363 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	MRS4	P23500	304 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	DEG1	P31115	442 aa	Known RBP	3.14	□□□□□ -1.91
TRX3	YCR083W	ERG2	P32352	222 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	GLC7	P32598	312 aa	Known RBP	3.14	□□□□□ -1.91
TRX3	YCR083W	MNS1	P32906	549 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	SWD2	P36104	329 aa	Predicted RBP	3.14	□□□□□ -1.91
TRX3	YCR083W	ARC40	P38328	384 aa	Known RBP	3.14	□□□□□ -1.91
TRX3	YCR083W	PGD1	P40356	397 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	IKS1	P47042	667 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	YJR056C	P47115	236 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	SSN8	P47821	323 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	YGR026W	P53217	278 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	YMR082C	Q04276	118 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	GMC1	Q04399	608 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	MDM30	Q05930	598 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	RFU1	Q08003	200 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	ZEO1	Q08245	113 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	YOR186W	Q08560	144 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	USB1	Q12208	290 aa	Known RBP	3.14	□□□□□ -1.91
TRX3	YCR083W	YPR145C-A	Q2V2P0	78 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	YLR365W	Q7LIF2	110 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	YOR032W-A	Q8TGS1	66 aa		3.14	□□□□□ -1.91
TRX3	YCR083W	ACC1	Q00955	2233 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	CDC28	P00546	298 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	YPT1	P01123	206 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	RPS16A	P0CX51	143 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	RPS16B	P0CX52	143 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	CKA1	P15790	372 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	SAG1	P20840	650 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	YCR101C	P25607	182 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	ERV15	P38312	142 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	SLM6	P38343	150 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	YEA4	P40004	342 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	SPC25	P40014	221 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	XBP1	P40489	647 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
TRX3	YCR083W	GTT1	P40582	234 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	NSE4	P43124	402 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	ECO1	P43605	281 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	RPA34	P47006	233 aa	Predicted RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	MSO1	P53604	210 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	YIF1	P53845	314 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	MRP51	Q02950	344 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	YMR279C	Q03263	540 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	TSA2	Q04120	196 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	DPB4	Q04603	196 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	YMR253C	Q04835	414 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	COQ11	Q05892	277 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	IZH2	Q12442	317 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	AIM45	Q12480	344 aa	Known RBP	3.13	□□□□□ -1.91
TRX3	YCR083W	IRA1	P18963	3092 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	IRA2	P19158	3079 aa		3.13	□□□□□ -1.91
TRX3	YCR083W	STF1	P01098	86 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	GDH1	P07262	454 aa	Known RBP	3.12	□□□□□ -1.91
TRX3	YCR083W	SPS4	P09937	338 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	CLB6	P32943	380 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	RPB7	P34087	171 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	MRPL4	P36517	319 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	MRPL39	P36533	70 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	RIB5	P38145	238 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	ATG8	P38182	117 aa	RIP-Chip data	3.12	□□□□□ -1.91	not detected
TRX3	YCR083W	YBR292C	P38357	123 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	PRS2	P38620	318 aa	Known RBP	3.12	□□□□□ -1.91
TRX3	YCR083W	UIP3	P39547	235 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	PRM5	P40476	318 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YIL029C	P40538	142 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	HXT14	P42833	540 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YJR012C	P47087	207 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	TIM21	P53220	239 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YNR066C	P53752	436 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	SKO1	Q02100	647 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	ADD37	Q03233	198 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YDR209C	Q03480	137 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	TMA23	Q03525	211 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	NUP53	Q03790	475 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YMR090W	Q04304	227 aa	Known RBP	3.12	□□□□□ -1.91
TRX3	YCR083W	YOL029C	Q08187	201 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YOR015W	Q12169	119 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YDL180W	Q12301	547 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	YPR108W-A	Q3E7B3	70 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	COA2	Q3E823	68 aa		3.12	□□□□□ -1.91
TRX3	YCR083W	CBP6	P07253	162 aa	Predicted RBP	3.11	□□□□□ -1.91
TRX3	YCR083W	APA2	P22108	325 aa		3.11	□□□□□ -1.91
TRX3	YCR083W	ERV1	P27882	189 aa		3.11	□□□□□ -1.91
TRX3	YCR083W	MCH2	P36032	473 aa		3.11	□□□□□ -1.91
TRX3	YCR083W	YEL057C	P39983	233 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms