RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B BCY1P07278 416 aaKnown RBP-0.46□□□□□ -2.48
HTL1YCR020W-B KSS1P14681 368 aa-0.46□□□□□ -2.48
HTL1YCR020W-B URA6P15700 204 aa-0.46□□□□□ -2.48
HTL1YCR020W-B ATP15P21306 62 aa-0.46□□□□□ -2.48
HTL1YCR020W-B UBC8P28263 218 aa-0.46□□□□□ -2.48
HTL1YCR020W-B NTF2P33331 125 aaKnown RBP-0.46□□□□□ -2.48
HTL1YCR020W-B MPC3P53311 146 aa-0.46□□□□□ -2.48
HTL1YCR020W-B MRPL50P53724 139 aa-0.46□□□□□ -2.48
HTL1YCR020W-B DGA1Q08650 418 aa-0.46□□□□□ -2.48
HTL1YCR020W-B YFR032C-BQ8TGU2 87 aa-0.46□□□□□ -2.48
HTL1YCR020W-B MRPL25P23369 157 aa-0.47□□□□□ -2.48
HTL1YCR020W-B IDH1P28834 360 aaKnown RBP RIP-Chip data-0.47□□□□□ -2.48not detected
HTL1YCR020W-B PTM1P32857 523 aa-0.47□□□□□ -2.48
HTL1YCR020W-B YBR242WP38331 238 aa-0.47□□□□□ -2.48
HTL1YCR020W-B RMD6P39975 231 aa-0.47□□□□□ -2.48
HTL1YCR020W-B DAD4P69851 72 aa-0.47□□□□□ -2.48
HTL1YCR020W-B YDR249CQ03787 373 aa-0.47□□□□□ -2.48
HTL1YCR020W-B CDC123Q05791 360 aa-0.47□□□□□ -2.48
HTL1YCR020W-B PRP11Q07350 266 aaPredicted RBP-0.47□□□□□ -2.48
HTL1YCR020W-B PAM18Q07914 168 aa-0.47□□□□□ -2.48
HTL1YCR020W-B BNA6P43619 295 aa-0.48□□□□□ -2.49
HTL1YCR020W-B RRN5Q02983 363 aa-0.48□□□□□ -2.49
HTL1YCR020W-B FYV12Q08559 129 aa-0.48□□□□□ -2.49
HTL1YCR020W-B POR1P04840 283 aaKnown RBP-0.49□□□□□ -2.49
HTL1YCR020W-B RPB3P16370 318 aaKnown RBP-0.49□□□□□ -2.49
HTL1YCR020W-B FAR7P43592 221 aa-0.49□□□□□ -2.49
HTL1YCR020W-B BXI1P48558 297 aa-0.49□□□□□ -2.49
HTL1YCR020W-B FYV6P53913 173 aa-0.49□□□□□ -2.49
HTL1YCR020W-B KRE28Q04431 385 aa-0.49□□□□□ -2.49
HTL1YCR020W-B FIT1Q04433 528 aa-0.49□□□□□ -2.49
HTL1YCR020W-B PRM3Q08931 133 aa-0.49□□□□□ -2.49
HTL1YCR020W-B YHR214C-EQ8TGK0 99 aa-0.49□□□□□ -2.49
HTL1YCR020W-B SPT3P06844 337 aa-0.5□□□□□ -2.49
HTL1YCR020W-B TCA17P32613 152 aa-0.5□□□□□ -2.49
HTL1YCR020W-B APS1P35181 156 aa-0.5□□□□□ -2.49
HTL1YCR020W-B LIA1P47120 325 aaKnown RBP-0.5□□□□□ -2.49
HTL1YCR020W-B GET1P53192 235 aa-0.5□□□□□ -2.49
HTL1YCR020W-B YLR173WQ06247 608 aa-0.5□□□□□ -2.49
HTL1YCR020W-B IRC23Q08416 157 aa-0.5□□□□□ -2.49
HTL1YCR020W-B SEN2P16658 377 aa-0.51□□□□□ -2.49
HTL1YCR020W-B CKS1P20486 150 aaKnown RBP-0.51□□□□□ -2.49
HTL1YCR020W-B PAN3P36102 679 aaPredicted RBP-0.51□□□□□ -2.49
HTL1YCR020W-B DCV1P43595 202 aa-0.51□□□□□ -2.49
HTL1YCR020W-B RNH202Q05635 350 aa-0.51□□□□□ -2.49
HTL1YCR020W-B ATG31Q12421 196 aa-0.51□□□□□ -2.49
HTL1YCR020W-B ARO7P32178 256 aa-0.52□□□□□ -2.49
HTL1YCR020W-B LDB7P38210 180 aa-0.52□□□□□ -2.49
HTL1YCR020W-B ALB1P47019 175 aaPredicted RBP-0.52□□□□□ -2.49
HTL1YCR020W-B AIM25P47140 327 aa-0.52□□□□□ -2.49
HTL1YCR020W-B UBC12P52491 188 aa-0.52□□□□□ -2.49
HTL1YCR020W-B VPS71Q03433 280 aa-0.52□□□□□ -2.49
HTL1YCR020W-B TAR1Q8TGM6 124 aa-0.52□□□□□ -2.49
HTL1YCR020W-B ALG13P53178 202 aa-0.53□□□□□ -2.49
HTL1YCR020W-B THG1P53215 237 aaKnown RBP-0.53□□□□□ -2.49
HTL1YCR020W-B YGR050CP53231 118 aa-0.53□□□□□ -2.49
HTL1YCR020W-B IKI3Q06706 1349 aaKnown RBP-0.54□□□□□ -2.5
HTL1YCR020W-B BRR6P53062 197 aa-0.54□□□□□ -2.5
HTL1YCR020W-B YNL134CP53912 376 aaKnown RBP-0.54□□□□□ -2.5
HTL1YCR020W-B SEY1Q99287 776 aa-0.54□□□□□ -2.5
HTL1YCR020W-B RPO26P20435 155 aa-0.55□□□□□ -2.5
HTL1YCR020W-B SFK1P35735 353 aa-0.55□□□□□ -2.5
HTL1YCR020W-B GCN20P43535 752 aaKnown RBP-0.55□□□□□ -2.5
HTL1YCR020W-B YJR111CP47148 283 aaKnown RBP-0.55□□□□□ -2.5
HTL1YCR020W-B HNT1Q04344 158 aaKnown RBP-0.55□□□□□ -2.5
HTL1YCR020W-B KAP95Q06142 861 aaKnown RBP-0.55□□□□□ -2.5
HTL1YCR020W-B YHR213W-BQ8TGK1 99 aa-0.55□□□□□ -2.5
HTL1YCR020W-B GSP2P32836 220 aaKnown RBP-0.56□□□□□ -2.5
HTL1YCR020W-B SSO1P32867 290 aa-0.56□□□□□ -2.5
HTL1YCR020W-B MAK5P38112 773 aaPredicted RBP-0.56□□□□□ -2.5
HTL1YCR020W-B YJR015WP47090 510 aa-0.56□□□□□ -2.5
HTL1YCR020W-B YMR099CQ03161 297 aaKnown RBP-0.56□□□□□ -2.5
HTL1YCR020W-B YMR295CQ03559 197 aa-0.56□□□□□ -2.5
HTL1YCR020W-B YCR001WP25347 104 aa-0.57□□□□□ -2.5
HTL1YCR020W-B TMA23Q03525 211 aa-0.57□□□□□ -2.5
HTL1YCR020W-B ELP6Q04868 273 aa-0.57□□□□□ -2.5
HTL1YCR020W-B CFT1Q06632 1357 aaKnown RBP-0.57□□□□□ -2.5
HTL1YCR020W-B SBH2P52871 88 aa-0.58□□□□□ -2.5
HTL1YCR020W-B PET191Q02772 108 aa-0.58□□□□□ -2.5
HTL1YCR020W-B ABP140Q08641 628 aaKnown RBP-0.58□□□□□ -2.5
HTL1YCR020W-B JLP1Q12358 412 aa-0.58□□□□□ -2.5
HTL1YCR020W-B RPL28P02406 149 aaKnown RBP-0.59□□□□□ -2.5
HTL1YCR020W-B RPL25P04456 142 aaKnown RBP-0.59□□□□□ -2.5
HTL1YCR020W-B YOL013W-AP0C272 63 aaPredicted RBP-0.59□□□□□ -2.5
HTL1YCR020W-B GCN3P14741 305 aa-0.59□□□□□ -2.5
HTL1YCR020W-B YCR090CP25654 182 aaKnown RBP-0.59□□□□□ -2.5
HTL1YCR020W-B PAM17P36147 197 aa-0.59□□□□□ -2.5
HTL1YCR020W-B HHY1P39982 102 aa-0.59□□□□□ -2.5
HTL1YCR020W-B COX15P40086 486 aa-0.59□□□□□ -2.5
HTL1YCR020W-B COG5P53951 403 aa-0.59□□□□□ -2.5
HTL1YCR020W-B SHH3Q04487 196 aa-0.59□□□□□ -2.5
HTL1YCR020W-B MED4Q12343 284 aa-0.59□□□□□ -2.5
HTL1YCR020W-B SEC4P07560 215 aaKnown RBP-0.6□□□□□ -2.51
HTL1YCR020W-B RPC17P47076 161 aa-0.6□□□□□ -2.51
HTL1YCR020W-B ARP3P47117 449 aaKnown RBP-0.6□□□□□ -2.51
HTL1YCR020W-B MIC26P50087 233 aa-0.6□□□□□ -2.51
HTL1YCR020W-B GET4Q12125 312 aa-0.6□□□□□ -2.51
HTL1YCR020W-B MATALPHA1P0CY06 175 aa-0.61□□□□□ -2.51
HTL1YCR020W-B HMLALPHA1P0CY07 175 aa-0.61□□□□□ -2.51
HTL1YCR020W-B STF2P16965 84 aa-0.61□□□□□ -2.51
HTL1YCR020W-B MAG1P22134 296 aaKnown RBP-0.61□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 112.5 ms