RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 PRM5P40476 318 aa8.7□□□□□ -1.02
RDN18-2RDN18-2 DXO1Q06349 442 aa8.7□□□□□ -1.02
RDN18-2RDN18-2 YPD1Q07688 167 aa8.7□□□□□ -1.02
RDN18-2RDN18-2 WHI5Q12416 295 aa8.7□□□□□ -1.02
RDN18-2RDN18-2 AGC1Q12482 902 aa8.7□□□□□ -1.02
RDN18-2RDN18-2 FOL3Q12676 427 aaPredicted RBP8.7□□□□□ -1.02
RDN18-2RDN18-2 SDH8P38345 138 aa8.69□□□□□ -1.02
RDN18-2RDN18-2 VMA21P41806 77 aa8.69□□□□□ -1.02
RDN18-2RDN18-2 TAF4P50105 388 aa8.69□□□□□ -1.02
RDN18-2RDN18-2 HED1Q03937 162 aa8.69□□□□□ -1.02
RDN18-2RDN18-2 YOL029CQ08187 201 aa8.69□□□□□ -1.02
RDN18-2RDN18-2 RNH203Q12338 110 aa8.69□□□□□ -1.02
RDN18-2RDN18-2 SNU23Q12368 194 aaPredicted RBP8.69□□□□□ -1.02
RDN18-2RDN18-2 TRA1P38811 3744 aa8.69□□□□□ -1.02
RDN18-2RDN18-2 RPB10P22139 70 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 UPS2P35200 230 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 MOG1P47123 218 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 DAN1P47178 298 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 PEF1P53238 335 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 FSH2Q05015 223 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 DCS1Q06151 350 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 PAM18Q07914 168 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 YPL264CQ08980 353 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 CLB6P32943 380 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 NTF2P33331 125 aaKnown RBP8.68□□□□□ -1.02
RDN18-2RDN18-2 RPL14AP36105 138 aaKnown RBP8.68□□□□□ -1.02
RDN18-2RDN18-2 YBR292CP38357 123 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 RPL14BP38754 138 aaKnown RBP8.68□□□□□ -1.02
RDN18-2RDN18-2 PCL7P40186 285 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 GTT1P40582 234 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 SIP18P50263 79 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 YDR114CQ04597 100 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 UPS1Q05776 175 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 YFH1Q07540 174 aa8.68□□□□□ -1.02
RDN18-2RDN18-2 SEC62P21825 274 aa8.67□□□□□ -1.02
RDN18-2RDN18-2 APA2P22108 325 aa8.67□□□□□ -1.02
RDN18-2RDN18-2 XPT1P47165 209 aa8.67□□□□□ -1.02
RDN18-2RDN18-2 TIM21P53220 239 aa8.67□□□□□ -1.02
RDN18-2RDN18-2 RPB3P16370 318 aaKnown RBP8.66□□□□□ -1.02
RDN18-2RDN18-2 SHM2P37291 469 aaKnown RBP8.66□□□□□ -1.02
RDN18-2RDN18-2 MOH1P38191 138 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 BNS1P50084 137 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 YDC1Q02896 317 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 ZEO1Q08245 113 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 USV1Q12132 391 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 SPO13P23624 291 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 CDC50P25656 391 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 AHT1P29589 182 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 YMR262WP38430 313 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 ERG25P53045 309 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 GEP7P53171 287 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 PDR17P53844 350 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 DGK1Q12382 290 aa8.66□□□□□ -1.02
RDN18-2RDN18-2 HEM4P06174 275 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 SDH4P37298 181 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 CUE1P38428 203 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 PEX7P39108 375 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 SEC24P40482 926 aaKnown RBP8.65□□□□□ -1.02
RDN18-2RDN18-2 SLM1P40485 686 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 WSC2P53832 503 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 HSK3P69852 69 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 RSM10Q03201 203 aa8.65□□□□□ -1.02
RDN18-2RDN18-2 GCN1P33892 2672 aaKnown RBP8.64□□□□□ -1.03
RDN18-2RDN18-2 ADH3P07246 375 aaKnown RBP8.64□□□□□ -1.03
RDN18-2RDN18-2 RPL35AP0CX84 120 aaKnown RBP8.64□□□□□ -1.03
RDN18-2RDN18-2 RPL35BP0CX85 120 aaKnown RBP8.64□□□□□ -1.03
RDN18-2RDN18-2 YKL107WP34251 309 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 GON7P46984 123 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 YAP1802P53309 568 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 YDR157WA0A023PZE8 133 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 REC104P33323 182 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 YOX1P34161 385 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 YGR050CP53231 118 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 SMM1P53720 384 aaKnown RBP8.64□□□□□ -1.03
RDN18-2RDN18-2 ALG12P53730 551 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 FCY22Q12119 530 aa8.64□□□□□ -1.03
RDN18-2RDN18-2 POF1P25576 258 aa8.63□□□□□ -1.03
RDN18-2RDN18-2 LAC1P28496 418 aa8.63□□□□□ -1.03
RDN18-2RDN18-2 YBR013CP38215 129 aa8.63□□□□□ -1.03
RDN18-2RDN18-2 RMD6P39975 231 aa8.63□□□□□ -1.03
RDN18-2RDN18-2 UBC13P52490 153 aa8.63□□□□□ -1.03
RDN18-2RDN18-2 RAD28Q12021 506 aa8.63□□□□□ -1.03
RDN18-2RDN18-2 BOL1Q3E793 110 aa8.63□□□□□ -1.03
RDN18-2RDN18-2 YGR269WP40326 108 aa8.62□□□□□ -1.03
RDN18-2RDN18-2 HXT14P42833 540 aa8.62□□□□□ -1.03
RDN18-2RDN18-2 ARP3P47117 449 aaKnown RBP8.62□□□□□ -1.03
RDN18-2RDN18-2 YGL262WP53054 175 aa8.62□□□□□ -1.03
RDN18-2RDN18-2 API2Q04413 109 aa8.62□□□□□ -1.03
RDN18-2RDN18-2 MSL5Q12186 476 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
RDN18-2RDN18-2 MRPL4P36517 319 aa8.61□□□□□ -1.03
RDN18-2RDN18-2 YCK3P39962 524 aa8.61□□□□□ -1.03
RDN18-2RDN18-2 RPN14P53196 417 aa8.61□□□□□ -1.03
RDN18-2RDN18-2 PAU4P53427 120 aa8.61□□□□□ -1.03
RDN18-2RDN18-2 HCH1P53834 153 aa8.61□□□□□ -1.03
RDN18-2RDN18-2 SME1Q12330 94 aaPredicted RBP8.61□□□□□ -1.03
RDN18-2RDN18-2 URA5P13298 226 aaKnown RBP8.61□□□□□ -1.03
RDN18-2RDN18-2 ROX3P25046 220 aa8.61□□□□□ -1.03
RDN18-2RDN18-2 PHS1P40857 217 aa8.61□□□□□ -1.03
RDN18-2RDN18-2 SMD3P43321 101 aaKnown RBP8.61□□□□□ -1.03
RDN18-2RDN18-2 YFL051CP43552 160 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 106.7 ms