RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 THAP9Q9H5L6 903 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 TSPAN3O60637 253 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 UBTFL6P0CB48 400 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 CLK1P49759 484 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 USP10Q14694 798 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 SNAP47Q5SQN1 464 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 ALKBH5Q6P6C2 394 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 FAM25AB3EWG3 89 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 FAM25CB3EWG5 89 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 FAM25GB3EWG6 89 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 ZNF500O60304 480 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 STIP1P31948 543 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 KIF23Q02241 960 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 SAPCD2Q86UD0 394 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 TUT1Q9H6E5 874 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 A0A087WUV0 522 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 PSMC6P62333 389 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 TTLL6Q8N841 843 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 OSBPL6Q9BZF3 934 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 SLC30A1Q9Y6M5 507 aa17.14■□□□□ 0.33
CACNA1A-238ENST00000637276 POTEB3A0JP26 581 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 POTECB2RU33 542 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 SH2B2O14492 632 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 MAPK10P53779 464 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 GLRA4Q5JXX5 417 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 POTEBQ6S5H4 581 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 PTPRN2Q92932 1015 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 OSBP2Q969R2 916 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 TRPC4Q9UBN4 977 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 EGFRP00533 1210 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 MAP3K10Q02779 954 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 TMEM60Q9H2L4 133 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 PIM2Q9P1W9 311 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 SHOC2Q9UQ13 582 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 ZNF185O15231 689 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 KIF1CO43896 1103 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 SH3BGRP55822 239 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 MRPS35P82673 323 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 TUBB6Q9BUF5 446 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 DBR1Q9UK59 544 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 SNX9Q9Y5X1 595 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 PIH1D3Q9NQM4 214 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 UMPSP11172 480 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 NLGN1Q8N2Q7 840 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 HPS3Q969F9 1004 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 THAP11Q96EK4 314 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 RHBDL2Q9NX52 303 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 TYW3Q6IPR3 259 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 CAAP1Q9H8G2 361 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 SNX6Q9UNH7 406 aa17.13■□□□□ 0.33
CACNA1A-238ENST00000637276 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 CEBPGP53567 150 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 ZMYM1Q5SVZ6 1142 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 NT5DC4Q86YG4 428 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 TEX13BQ9BXU2 312 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 LAD1O00515 517 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 AP3D1O14617 1153 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 RPN2P04844 631 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 AKR1B1P15121 316 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 PP2D1A8MPX8 630 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 TRIM13O60858 407 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 TRIM49P0CI25 452 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 TRIM49CP0CI26 452 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 CHRNA5P30532 468 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 GUCY1A3Q02108 690 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 MID2Q9UJV3 735 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 HAUS5O94927 633 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 STAU1O95793 577 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 ARFIP2P53365 341 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 KLC1Q07866 573 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 COX10Q12887 443 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 SEZ6Q53EL9 994 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 ZNF438Q7Z4V0 828 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 SYTL1Q8IYJ3 562 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 PPP1R13LQ8WUF5 828 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 RGS12O14924 1447 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 A0A0G2JLW4 131 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 HOXB7P09629 217 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 ATP6V1B1P15313 513 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 KRT20P35900 424 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 PRIM2P49643 509 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 SEPT2Q15019 361 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 CLYBLQ8N0X4 340 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 TRPC4APQ8TEL6 797 aa17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 NOP53Q9NZM5 478 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-238ENST00000637276 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-238ENST00000637276 DHX36Q9H2U1 1008 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms