RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PSMC6P62333 389 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 HSP90AA5PQ58FG0 334 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 CDKAL1Q5VV42 579 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 TRMT10CQ7L0Y3 403 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 GPRC5AQ8NFJ5 357 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 RUBCNQ92622 972 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 GMCL1Q96IK5 515 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 PRMT1Q99873 361 aaKnown RBP13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 PACSIN1Q9BY11 444 aa13.15□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZBBXA8MT70 800 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CHN1P15882 459 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 POLE2P56282 527 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CXCL9Q07325 125 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CYP4A22Q5TCH4 519 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 C1orf146Q5VVC0 180 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 SYDE1Q6ZW31 735 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 C1orf131Q8NDD1 294 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 RDM1Q8NG50 284 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 GANCQ8TET4 914 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CCT8L2Q96SF2 557 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CARD9Q9H257 536 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 L2HGDHQ9H9P8 463 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 C17orf75Q9HAS0 396 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 SENP1Q9P0U3 644 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ZC3H7BQ9UGR2 993 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 TSR3Q9UJK0 312 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 TNS2Q63HR2 1409 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 RALAP11233 206 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 IL1R1P14778 569 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 NPTX2P47972 431 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 SNRPFP62306 86 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CDR2Q01850 454 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ACTN3Q08043 901 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 MORF4L2Q15014 288 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 RASSF3Q86WH2 238 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ACSF2Q96CM8 615 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 RMDN1Q96DB5 314 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 YIPF3Q9GZM5 350 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CHMP2BQ9UQN3 213 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 PHF20L1A8MW92 1017 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 HOXD10P28358 340 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 SHMT1P34896 483 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 BACE1P56817 501 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CDC42EP1Q00587 391 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ZNF235Q14590 738 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 FBXL16Q8N461 479 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 MMGT1Q8N4V1 131 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 FEZF2Q8TBJ5 459 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 USP33Q8TEY7 942 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 CCDC138Q96M89 665 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 KLF6Q99612 283 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 EHD4Q9H223 541 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ITGB3P05106 788 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 EEF1B2P24534 225 aaKnown RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ERFP50548 548 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 FAM161BQ96MY7 647 aa13.14□□□□□ -0.31
TNFAIP3-206ENST00000612899 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 SGPL1O95470 568 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 CLCN3P51790 818 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 SPATA2LQ8IUW3 424 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ARHGEF26Q96DR7 871 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 PNKPQ96T60 521 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 PARK7Q99497 189 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 FAM96AQ9H5X1 160 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 HACD3Q9P035 362 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 MST1RQ04912 1400 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 RPS6KA5O75582 802 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 IL18RAPO95256 599 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 CUL3Q13618 768 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 DCAF6Q58WW2 860 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 GNASQ5JWF2 1037 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ANGPTL8Q6UXH0 198 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 DNAAF5Q86Y56 855 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ULK4Q96C45 1275 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 OLA1Q9NTK5 396 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ARHGAP20Q9P2F6 1191 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 TJP2Q9UDY2 1190 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 SLIT1O75093 1534 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 E5RI56 91 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ITGA8P53708 1063 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 SLC29A2Q14542 456 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ACCSLQ4AC99 568 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 GLRA4Q5JXX5 417 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ZNF720Q7Z2F6 126 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 KCNV2Q8TDN2 545 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 MED15Q96RN5 788 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 ISCUQ9H1K1 167 aa13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 DDX4Q9NQI0 724 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 XPO7Q9UIA9 1087 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-206ENST00000612899 NEMP1O14524 444 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms