RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-219ENST00000606715 C3orf70A6NLC5 250 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-219ENST00000606715 LRRC53A6NM62 1247 aa11.59□□□□□ -0.55
SHANK2-219ENST00000606715 TLR2O60603 784 aa11.59□□□□□ -0.55
SHANK2-219ENST00000606715 NPTXRO95502 500 aa11.59□□□□□ -0.55
SHANK2-219ENST00000606715 CLTAP09496 248 aa11.59□□□□□ -0.55
SHANK2-219ENST00000606715 MBL2P11226 248 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-219ENST00000606715 FASTKD1Q53R41 847 aaKnown RBP11.59□□□□□ -0.55
SHANK2-219ENST00000606715 TTC17Q96AE7 1141 aa11.59□□□□□ -0.55
SHANK2-219ENST00000606715 THG1LQ9NWX6 298 aaKnown RBP11.59□□□□□ -0.55
SHANK2-219ENST00000606715 GTPBP10A4D1E9 387 aaKnown RBP11.58□□□□□ -0.56
SHANK2-219ENST00000606715 VGLL3A8MV65 326 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 NDUFS3O75489 264 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 TGFB3P10600 412 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 HMOX2P30519 316 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
SHANK2-219ENST00000606715 TBC1D1Q86TI0 1168 aaPredicted RBP11.58□□□□□ -0.56
SHANK2-219ENST00000606715 WDR75Q8IWA0 830 aaKnown RBP11.58□□□□□ -0.56
SHANK2-219ENST00000606715 KCNB2Q92953 911 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 NAF1Q96HR8 494 aaKnown RBP11.58□□□□□ -0.56
SHANK2-219ENST00000606715 PARVAQ9NVD7 372 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 CAND2O75155 1236 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 FGGP02679 453 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 RGS7P49802 495 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 CASP7P55210 303 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 NFIAQ12857 509 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 STARD3Q14849 445 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 SLC9A5Q14940 896 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 ZSCAN26Q16670 478 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 KRT80Q6KB66 452 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 RAD18Q9NS91 495 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 NDUFB5O43674 189 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 PFDN1O60925 122 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 ZC3H11AO75152 810 aaKnown RBP eCLIP11.58□□□□□ -0.56
SHANK2-219ENST00000606715 CKMP06732 381 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 CYP11B2P19099 503 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 ATF7IP2Q5U623 682 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 CCDC197Q8NCU1 140 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 ZNF564Q8TBZ8 553 aaPredicted RBP11.58□□□□□ -0.56
SHANK2-219ENST00000606715 USP33Q8TEY7 942 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 TAAR1Q96RJ0 339 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 REEP2Q9BRK0 252 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 NFKBIZQ9BYH8 718 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 GPR63Q9BZJ6 419 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 PSMD3O43242 534 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 DYRK3O43781 588 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 VCLP18206 1134 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 PTPAQ15257 358 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 GAS2L3Q86XJ1 694 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 TRIM4Q9C037 500 aa11.58□□□□□ -0.56
SHANK2-219ENST00000606715 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 TRPA1O75762 1119 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 ACSL3O95573 720 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 HLA-DPA1P20036 260 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 NMT1P30419 496 aaKnown RBP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SREBF1P36956 1147 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 AVPR1AP37288 418 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SLC1A1P43005 524 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SLC11A2P49281 568 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 PPATQ06203 517 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 C2orf54Q08AI8 447 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 MAPRE1Q15691 268 aaKnown RBP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SMAD1Q15797 465 aaKnown RBP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 ADSSL1Q8N142 457 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 WNT8AQ9H1J5 351 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 CATSPERBQ9H7T0 1116 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 THEGQ9P2T0 379 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 NRBP1Q9UHY1 535 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 PHLPP1O60346 1717 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SUPT3HB4E1H0 165 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 AP3B1O00203 1094 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 GFAPP14136 432 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 EPHB3P54753 998 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 ZBTB17Q13105 803 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 TMEM259Q4ZIN3 620 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 FSCBQ5H9T9 825 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 CHMP1BQ7LBR1 199 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 RHOT1Q8IXI2 618 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SNX31Q8N9S9 440 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SHCBP1Q8NEM2 672 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 LIMA1Q9UHB6 759 aaKnown RBP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 AARS2Q5JTZ9 985 aaKnown RBP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 BTN2A2Q8WVV5 523 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 TSEN34Q9BSV6 310 aaKnown RBP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 TRIM55Q9BYV6 548 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 RUBCNLQ9H714 662 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 FBXL5Q9UKA1 691 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 PKP3Q9Y446 797 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 SPACA6W5XKT8 324 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 FRMD3A2A2Y4 597 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 FAM47E-STBD1D6RA91 191 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 VCAM1P19320 739 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 CYP2C19P33261 490 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 ACADSBP45954 432 aa11.57□□□□□ -0.56
SHANK2-219ENST00000606715 AARSP49588 968 aaKnown RBP eCLIP11.57□□□□□ -0.56
SHANK2-219ENST00000606715 ACTR2P61160 394 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms