RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 MTRRQ9UBK8 725 aa21.67■■□□□ 1.06
SSBP4-210ENST00000601444 CDH22Q9UJ99 828 aa21.67■■□□□ 1.06
SSBP4-210ENST00000601444 FSD2A1L4K1 749 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 TRIM49BA6NDI0 452 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 GRXCR2A6NFK2 248 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 TGM5O43548 720 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 AKAP3O75969 853 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 KRT19P08727 400 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 IL9P15248 144 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 TNNI1P19237 187 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 OR1D2P34982 312 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 DLG4P78352 724 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 ADAM9Q13443 819 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 MYBPC2Q14324 1141 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 NFIL3Q16649 462 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 DUOXA2Q1HG44 320 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 ANKRD40Q6AI12 368 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 CENPPQ6IPU0 288 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 PTCRAQ6ISU1 281 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-210ENST00000601444 LILRA6Q6PI73 481 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 ANKS3Q6ZW76 656 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 GPT2Q8TD30 523 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 ANKRD36BP1Q96IX9 119 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 S1PR5Q9H228 398 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 CLSTN2Q9H4D0 955 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 KIAA1468Q9P260 1216 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 CDY1Q9Y6F8 540 aa21.66■■□□□ 1.06
SSBP4-210ENST00000601444 A0A0C4DFX4 3053 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 LRRIQ3A6PVS8 624 aaPredicted RBP21.65■■□□□ 1.06
SSBP4-210ENST00000601444 PPP1R3GB7ZBB8 358 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 MBTPS2O43462 519 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 TBC1D4O60343 1298 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 GLUD1P00367 558 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 TNNC2P02585 160 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 TAF6P49848 677 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 CREMQ03060 361 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 TJAP1Q5JTD0 557 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 PDXDC1Q6P996 788 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 TRAPPC11Q7Z392 1133 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 SMRP1Q8NCR6 262 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 PARD3BQ8TEW8 1205 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 ITGA11Q9UKX5 1188 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 BACE2Q9Y5Z0 518 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 VCANP13611 3396 aa21.65■■□□□ 1.06
SSBP4-210ENST00000601444 KPNA7A9QM74 516 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 CST3P01034 146 aaPredicted RBP21.64■■□□□ 1.05
SSBP4-210ENST00000601444 SRGAP2BP0DMP2 458 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 RBP5P82980 135 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 EDRF1Q3B7T1 1238 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 APPL2Q8NEU8 664 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 MAN1C1Q9NR34 630 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 FBXL5Q9UKA1 691 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 FRMD4BQ9Y2L6 1034 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 PLXNA3P51805 1871 aa21.64■■□□□ 1.05
SSBP4-210ENST00000601444 CYB561D2O14569 222 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 WEE2P0C1S8 567 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 RPL13P26373 211 aaKnown RBP21.63■■□□□ 1.05
SSBP4-210ENST00000601444 ARPP19P56211 112 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 YWHAHQ04917 246 aaPredicted RBP21.63■■□□□ 1.05
SSBP4-210ENST00000601444 BFSP1Q12934 665 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 RAB33AQ14088 237 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 CTXN3Q4LDR2 81 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 C1orf220Q5T0J3 134 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 RARS2Q5T160 578 aaKnown RBP21.63■■□□□ 1.05
SSBP4-210ENST00000601444 KLHL10Q6JEL2 608 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 GTPBP4Q9BZE4 634 aaKnown RBP21.63■■□□□ 1.05
SSBP4-210ENST00000601444 BRWD1Q9NSI6 2320 aa21.63■■□□□ 1.05
SSBP4-210ENST00000601444 SCN1AP35498 2009 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 H7C4K7 107 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 OAZ2O95190 189 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 ODC1P11926 461 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 HOXB8P17481 243 aaPredicted RBP21.62■■□□□ 1.05
SSBP4-210ENST00000601444 CCNE1P24864 410 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 CLDN10P78369 228 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 SMAD4Q13485 552 aaKnown RBP21.62■■□□□ 1.05
SSBP4-210ENST00000601444 SV2CQ496J9 727 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 SLC8B1Q6J4K2 584 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 TMC5Q6UXY8 1006 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 FAM186BQ8IYM0 893 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 LRRC52Q8N7C0 313 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 KREMEN2Q8NCW0 462 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 DHTKD1Q96HY7 919 aaPredicted RBP21.62■■□□□ 1.05
SSBP4-210ENST00000601444 ZNF560Q96MR9 790 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 NECAB3Q96P71 396 aaPredicted RBP21.62■■□□□ 1.05
SSBP4-210ENST00000601444 NUP62CLQ9H1M0 184 aa21.62■■□□□ 1.05
SSBP4-210ENST00000601444 USP15Q9Y4E8 981 aaPredicted RBP21.62■■□□□ 1.05
SSBP4-210ENST00000601444 C5orf42Q9H799 3197 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 GOLGA6L22H0YM25 854 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 PSMA7O14818 248 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 RFPL2O75678 378 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 C4BPAP04003 597 aaKnown RBP21.61■■□□□ 1.05
SSBP4-210ENST00000601444 OR4Q2P0C623 313 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 TYMPP19971 482 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 PAX3P23760 479 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 PSMC2P35998 433 aaKnown RBP21.61■■□□□ 1.05
SSBP4-210ENST00000601444 PNPLA4P41247 253 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 ROR1Q01973 937 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 STIM1Q13586 685 aa21.61■■□□□ 1.05
SSBP4-210ENST00000601444 TDRD10Q5VZ19 366 aaKnown RBP21.61■■□□□ 1.05
SSBP4-210ENST00000601444 WSCD1Q658N2 575 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms