RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 CD101Q93033 1021 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 HHIPL1Q96JK4 782 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 RNPC3Q96LT9 517 aaKnown RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 APBA2Q99767 749 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 MIS12Q9H081 205 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 RAB17Q9H0T7 212 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 LHX5Q9H2C1 402 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 MINDY3Q9H8M7 445 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 PARVAQ9NVD7 372 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 ADAM22Q9P0K1 906 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 DMGDHQ9UI17 866 aaKnown RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 STRIP2Q9ULQ0 834 aa11.08□□□□□ -0.64
VPS25-203ENST00000589520 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
VPS25-203ENST00000589520 PLXNB2O15031 1838 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 LACTBL1A8MY62 500 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 PODXLO00592 558 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 B4GALT5O43286 388 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 SART1O43290 800 aaKnown RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 TSPAN1O60635 241 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 HEXIM1O94992 359 aaKnown RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 FGGP02679 453 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 SLC10A3P09131 477 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 ZNF286BP0CG31 522 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 ARF4P18085 180 aaPredicted RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 POLR2BP30876 1174 aaKnown RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 CHRNA3P32297 505 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 CETN2P41208 172 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 AARSP49588 968 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS25-203ENST00000589520 PEX5P50542 639 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 DNA2P51530 1060 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 DRG2P55039 364 aaKnown RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 NOMO3P69849 1222 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 STILQ15468 1287 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 GJC2Q5T442 439 aaPredicted RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 EEF1DP3Q658K8 133 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 SPOPLQ6IQ16 392 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 PLEKHA7Q6IQ23 1121 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 MON1BQ7L1V2 547 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 SAPCD2Q86UD0 394 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 DNAAF5Q86Y56 855 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 MREGQ8N565 214 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 FAM71BQ8TC56 605 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 CYFIP2Q96F07 1278 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 BCO2Q9BYV7 579 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 FAM129AQ9BZQ8 928 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 XYLT2Q9H1B5 865 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS25-203ENST00000589520 FAM114A2Q9NRY5 505 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 HOMER3Q9NSC5 361 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 CISHQ9NSE2 258 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 WDR35Q9P2L0 1181 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 FEZ2Q9UHY8 353 aaPredicted RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 RASAL2Q9UJF2 1139 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 UTP11Q9Y3A2 253 aaKnown RBP11.07□□□□□ -0.64
VPS25-203ENST00000589520 MROH7Q68CQ1 1323 aa11.07□□□□□ -0.64
VPS25-203ENST00000589520 BHMG1C9JSJ3 638 aaPredicted RBP11.06□□□□□ -0.64
VPS25-203ENST00000589520 HAS3O00219 553 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 IGF2BP3O00425 579 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS25-203ENST00000589520 PSTPIP1O43586 416 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 XPOTO43592 962 aaKnown RBP11.06□□□□□ -0.64
VPS25-203ENST00000589520 OPA1O60313 960 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 IGHA2P01877 340 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 VTNP04004 478 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 IQCF3P0C7M6 154 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 MMP8P22894 467 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
VPS25-203ENST00000589520 TM4SF4P48230 202 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 PSEN2P49810 448 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 YARSP54577 528 aaKnown RBP11.06□□□□□ -0.64
VPS25-203ENST00000589520 LACTBP83111 547 aaPredicted RBP11.06□□□□□ -0.64
VPS25-203ENST00000589520 GUCY2DQ02846 1103 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 MYO1EQ12965 1108 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 MFSD10Q14728 455 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 TMEM132DQ14C87 1099 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 SEZ6Q53EL9 994 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 NAA35Q5VZE5 725 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 NOTUMQ6P988 496 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 SLC27A1Q6PCB7 646 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 TLK2Q86UE8 772 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 KLHL7Q8IXQ5 586 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
VPS25-203ENST00000589520 FEZF2Q8TBJ5 459 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 SEC14L1Q92503 715 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 LRRC45Q96CN5 670 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 ARID3AQ99856 593 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 ADAMTS10Q9H324 1103 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 GOLPH3Q9H4A6 298 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 EPB41L5Q9HCM4 733 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 ACP6Q9NPH0 428 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 EHD2Q9NZN4 543 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 IP6K2Q9UHH9 426 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 ANAPC7Q9UJX3 599 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
VPS25-203ENST00000589520 PLXNA1Q9UIW2 1896 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms