RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLC39A11Q8N1S5 342 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 COLGALT1Q8NBJ5 622 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 FAM81BQ96LP2 452 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 ERGIC2Q96RQ1 377 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 COLEC11Q9BWP8 271 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 IMPG2Q9BZV3 1241 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 XYLT2Q9H1B5 865 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 RAB20Q9NX57 234 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 GDAP2Q9NXN4 497 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 ADAM28Q9UKQ2 775 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 LZTS1Q9Y250 596 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 R3HCC1Q9Y3T6 440 aaKnown RBP11.2□□□□□ -0.62
CCDC47-203ENST00000580986 PCDHB12Q9Y5F1 795 aa11.2□□□□□ -0.62
CCDC47-203ENST00000580986 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC47-203ENST00000580986 A0A1W2PQC6 194 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 LCHNA4D1U4 455 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 M0QZQ0 153 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 PHACTR2O75167 634 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 B3GAT3O94766 335 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 HLA-DRAP01903 254 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 TPM3P06753 285 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 CA3P07451 260 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 RFX1P22670 979 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 DNAJB2P25686 324 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 POLR2BP30876 1174 aaKnown RBP11.19□□□□□ -0.62
CCDC47-203ENST00000580986 BMPR1AP36894 532 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 PIK3CAP42336 1068 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 OR1G1P47890 313 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 SLC11A1P49279 550 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 LILRA4P59901 499 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 ERVK-21P61565 698 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 UBE3AQ05086 875 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 BIRC3Q13489 604 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 TRPC3Q13507 836 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 EXOC3L4Q17RC7 722 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 FKBP15Q5T1M5 1219 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 LMBRD2Q68DH5 695 aaPredicted RBP11.19□□□□□ -0.62
CCDC47-203ENST00000580986 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 CCDC150Q8NCX0 1101 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 RNF214Q8ND24 703 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 LMO3Q8TAP4 145 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 JAKMIP2Q96AA8 810 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 IGSF21Q96ID5 467 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 SUSD3Q96L08 255 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 TGS1Q96RS0 853 aaKnown RBP11.19□□□□□ -0.62
CCDC47-203ENST00000580986 RBSNQ9H1K0 784 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 GOLGA2P5Q9HBQ8 144 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
CCDC47-203ENST00000580986 MARCH5Q9NX47 278 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 SPG21Q9NZD8 308 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 AGAP1Q9UPQ3 857 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 TSC2P49815 1807 aa11.19□□□□□ -0.62
CCDC47-203ENST00000580986 SCN1AP35498 2009 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 CHD9Q3L8U1 2897 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 GRXCR1A8MXD5 290 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 KPNA7A9QM74 516 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 SYN3O14994 580 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 KIF4AO95239 1232 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 SERPINC1P01008 464 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
CCDC47-203ENST00000580986 CYP11A1P05108 521 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 P4HA1P13674 534 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 RABGGTBP53611 331 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 FANCCQ00597 558 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 GCNT1Q02742 428 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 TAP1Q03518 808 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 HSP90AA4PQ58FG1 418 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 CD300LGQ6UXG3 332 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 GBP6Q6ZN66 633 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 C3orf58Q8NDZ4 430 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 TMEM169Q96HH4 297 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 HPDLQ96IR7 371 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 PAAF1Q9BRP4 392 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 C11orf84Q9BUA3 381 aaPredicted RBP11.18□□□□□ -0.62
CCDC47-203ENST00000580986 OXCT2Q9BYC2 517 aaPredicted RBP11.18□□□□□ -0.62
CCDC47-203ENST00000580986 SLC28A3Q9HAS3 691 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 PLCB1Q9NQ66 1216 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 TAB2Q9NYJ8 693 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 GCNT4Q9P109 453 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 DSEQ9UL01 958 aa11.18□□□□□ -0.62
CCDC47-203ENST00000580986 YBX2Q9Y2T7 364 aaKnown RBP11.18□□□□□ -0.62
CCDC47-203ENST00000580986 CBFA2T2O43439 604 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 TACC1O75410 805 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 KRT19P08727 400 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 TYMPP19971 482 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 TBXAS1P24557 533 aaPredicted RBP11.17□□□□□ -0.62
CCDC47-203ENST00000580986 GUCY2FP51841 1108 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 UBASH3AP57075 661 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 MYL6P60660 151 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 NOP14P78316 857 aaKnown RBP11.17□□□□□ -0.62
CCDC47-203ENST00000580986 KRT17Q04695 432 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 NR1I3Q14994 352 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 ZNF699Q32M78 642 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 WDR44Q5JSH3 913 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms