RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 CASC1Q6TDU7 716 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 ADAT2Q7Z6V5 191 aaKnown RBP9.95□□□□□ -0.82
CFDP1-206ENST00000566254 ZAR1Q86SH2 424 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 VN1R2Q8NFZ6 395 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 POF1BQ8WVV4 589 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 SUSD6Q92537 303 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 P2RX5Q93086 422 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 NKD2Q969F2 451 aaPredicted RBP9.95□□□□□ -0.82
CFDP1-206ENST00000566254 COX4I2Q96KJ9 171 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 TBC1D32Q96NH3 1257 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 BCAS3Q9H6U6 928 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 MLXIPQ9HAP2 919 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 WHRNQ9P202 907 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 STOML1Q9UBI4 398 aa9.95□□□□□ -0.82
CFDP1-206ENST00000566254 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.95□□□□□ -0.82
CFDP1-206ENST00000566254 RIF1Q5UIP0 2472 aaKnown RBP9.95□□□□□ -0.82
CFDP1-206ENST00000566254 DMDP11532 3685 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 FAM186AA6NE01 2351 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 E7EWF7 191 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 GCOM1H8Y6P7 765 aaPredicted RBP9.94□□□□□ -0.82
CFDP1-206ENST00000566254 PPM1BO75688 479 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 CLSTN1O94985 981 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 POLR2MP0CAP2 368 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 ATF7P17544 494 aaPredicted RBP9.94□□□□□ -0.82
CFDP1-206ENST00000566254 LPIN1Q14693 890 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 SFRP5Q5T4F7 317 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 IL31RAQ8NI17 732 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 PIGSQ96S52 555 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 PDCD2LQ9BRP1 358 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 APOL5Q9BWW9 433 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 MAF1Q9H063 256 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 SMOC2Q9H3U7 446 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 TLE6Q9H808 572 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 MAD2L2Q9UI95 211 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 PCDHB12Q9Y5F1 795 aa9.94□□□□□ -0.82
CFDP1-206ENST00000566254 ANKRD62A6NC57 917 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 CCDC69A6NI79 296 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 SGSM2O43147 1006 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 KRT37O76014 449 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 ITGAVP06756 1048 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 ITGA4P13612 1032 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 ZNF445P59923 1031 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 SNW1Q13573 536 aaKnown RBP9.93□□□□□ -0.82
CFDP1-206ENST00000566254 GRM4Q14833 912 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 SEC23AQ15436 765 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 PRR23CQ6ZRP0 262 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 ZNF227Q86WZ6 799 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 SHISA5Q8N114 240 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 KREMEN2Q8NCW0 462 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 LRRN4CLQ8ND94 238 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 ZSWIM2Q8NEG5 633 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 CTCFLQ8NI51 663 aaPredicted RBP9.93□□□□□ -0.82
CFDP1-206ENST00000566254 LMBR1Q8WVP7 490 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 LINC01599Q8WXQ3 324 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 CUL5Q93034 780 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 HEXIM2Q96MH2 286 aaKnown RBP9.93□□□□□ -0.82
CFDP1-206ENST00000566254 PRDM14Q9GZV8 571 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 SEC63Q9UGP8 760 aaKnown RBP9.93□□□□□ -0.82
CFDP1-206ENST00000566254 FBXL21Q9UKT6 434 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 TELO2Q9Y4R8 837 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 RBM8AQ9Y5S9 174 aaKnown RBP9.93□□□□□ -0.82
CFDP1-206ENST00000566254 MYH7BA7E2Y1 1941 aa9.93□□□□□ -0.82
CFDP1-206ENST00000566254 NOP56O00567 594 aaKnown RBP9.92□□□□□ -0.82
CFDP1-206ENST00000566254 GNAT1P11488 350 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 CCND2P30279 289 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 KIF5BP33176 963 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 GSK3AP49840 483 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 GATMP50440 423 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 HSD17B4P51659 736 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 ADAM17P78536 824 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 MGAT3Q09327 533 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 KCNMA1Q12791 1236 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 PGM5Q15124 567 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 KCNV1Q6PIU1 500 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 C22orf34Q6ZV56 151 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 CMTR2Q8IYT2 770 aaKnown RBP9.92□□□□□ -0.82
CFDP1-206ENST00000566254 ATP8B4Q8TF62 1192 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 PPP1R14AQ96A00 147 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 RRP36Q96EU6 259 aaKnown RBP9.92□□□□□ -0.82
CFDP1-206ENST00000566254 RCC1LQ96I51 464 aaKnown RBP9.92□□□□□ -0.82
CFDP1-206ENST00000566254 Q96M66 194 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 MYL10Q9BUA6 226 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 LGR4Q9BXB1 951 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 ARHGEF4Q9NR80 690 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 CDH22Q9UJ99 828 aa9.92□□□□□ -0.82
CFDP1-206ENST00000566254 BAZ2BQ9UIF8 2168 aaKnown RBP9.91□□□□□ -0.82
CFDP1-206ENST00000566254 VPS13AQ96RL7 3174 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 PRC1O43663 620 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 PPP1R11O60927 126 aaPredicted RBP9.91□□□□□ -0.82
CFDP1-206ENST00000566254 CBX7O95931 251 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 TGFB3P10600 412 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 IBSPP21815 317 aaPredicted RBP9.91□□□□□ -0.82
CFDP1-206ENST00000566254 KIR3DL1P43629 444 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 DUSP6Q16828 381 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 CYP27C1Q4G0S4 372 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 ZC3H12BQ5HYM0 836 aaKnown RBP9.91□□□□□ -0.82
CFDP1-206ENST00000566254 FBXO47Q5MNV8 452 aa9.91□□□□□ -0.82
CFDP1-206ENST00000566254 UTP14CQ5TAP6 766 aaKnown RBP9.91□□□□□ -0.82
CFDP1-206ENST00000566254 MCTP2Q6DN12 878 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms