RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 NOP14P78316 857 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 CETN1Q12798 172 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 NCOA4Q13772 614 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 RAPGEF1Q13905 1077 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ZBTB6Q15916 424 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 HGSNATQ68CP4 663 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 UBE2Q1Q7Z7E8 422 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 MRPL10Q7Z7H8 261 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ZSCAN30Q86W11 494 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 NT5DC4Q86YG4 428 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 CD302Q8IX05 232 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 C17orf53Q8N3J3 647 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF397Q8NF99 534 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 OLIG1Q8TAK6 271 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 KIAA1524Q8TCG1 905 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 LPPQ93052 612 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 C18orf25Q96B23 403 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 VWCEQ96DN2 955 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 SCLYQ96I15 445 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 SPAG5Q96R06 1193 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ARID3AQ99856 593 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 STK33Q9BYT3 514 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 PPP1R12CQ9BZL4 782 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 XYLT2Q9H1B5 865 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 HIPK3Q9H422 1215 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 UBE2TQ9NPD8 197 aaPredicted RBP8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 AIPL1Q9NZN9 384 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ARHGAP20Q9P2F6 1191 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 TUBGCP4Q9UGJ1 667 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 PARP2Q9UGN5 583 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 MYO6Q9UM54 1294 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 ATP11BQ9Y2G3 1177 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 DERAQ9Y315 318 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 C2CD2Q9Y426 696 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 DAAM1Q9Y4D1 1078 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 NUB1Q9Y5A7 615 aa8.71□□□□□ -1.02
DEPDC4-207ENST00000549249 A0A0U1RQF3 1178 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 SMIM28A0A1B0GU29 152 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 FOXN3O00409 490 aaPredicted RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ARHGAP6O43182 974 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF623O75123 536 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 PHACTR2O75167 634 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 GFPT2O94808 682 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 CXCL10P02778 98 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ITGB3P05106 788 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ITGA4P13612 1032 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 CD46P15529 392 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ZSCAN20P17040 1043 aaPredicted RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 POLR2BP30876 1174 aaKnown RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 CYP2C18P33260 490 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 SOX5P35711 763 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 RAB27AP51159 221 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 AFF1P51825 1210 aaKnown RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 CCL23P55773 120 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 CDK17Q00537 523 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 NAB2Q15742 525 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ARHGAP44Q17R89 818 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 SFMBT2Q5VUG0 894 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 CYP26C1Q6V0L0 522 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 IRF2BP2Q7Z5L9 587 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 NECAB2Q7Z6G3 386 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF598Q86UK7 904 aaKnown RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ECHDC2Q86YB7 292 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 PPM1KQ8N3J5 372 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 UBR7Q8N806 425 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 GSTCDQ8NEC7 633 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 DBF4BQ8NFT6 615 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 SHC3Q92529 594 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 SYN2Q92777 582 aaPredicted RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 ZFP42Q96MM3 310 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 TMUB1Q9BVT8 246 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 RGS18Q9NS28 235 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 C1orf112Q9NSG2 853 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 MIOSQ9NXC5 875 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 DNAH12Q6ZR08 3092 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 TSC2P49815 1807 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 CEP290O15078 2479 aa8.7□□□□□ -1.02
DEPDC4-207ENST00000549249 COL4A6Q14031 1691 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ANO9A1A5B4 782 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 TRIM43BA6NCK2 446 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ESPNB1AK53 854 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 CLTBP09497 229 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ACO1P21399 889 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ITGB8P26012 769 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 MLH1P40692 756 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 PRKCIP41743 596 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 STAT1P42224 750 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 KCNJ6P48051 423 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 MFAP3P55082 362 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 FAM189BP81408 668 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 GCNT1Q02742 428 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ASIC2Q16515 512 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ASTE1Q2TB18 679 aaPredicted RBP8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF699Q32M78 642 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms