RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 AVENQ9NQS1 362 aaPredicted RBP12.95□□□□□ -0.34
GABPB1-206ENST00000543881 KCND2Q9NZV8 630 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 ANKFY1Q9P2R3 1169 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 F5P12259 2224 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 ZFHX4Q86UP3 3567 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 MYH11P35749 1972 aa12.95□□□□□ -0.34
GABPB1-206ENST00000543881 RALGAPA1Q6GYQ0 2036 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 LRP3O75074 770 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 PTPN2P17706 415 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 CCR3P51677 355 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 SMTNP53814 917 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 NCKAP1LP55160 1127 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 MCL1Q07820 350 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 NOLC1Q14978 699 aaKnown RBP eCLIP12.94□□□□□ -0.34
GABPB1-206ENST00000543881 SF3A1Q15459 793 aaKnown RBP12.94□□□□□ -0.34
GABPB1-206ENST00000543881 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 FAM3CQ92520 227 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 REEP2Q9BRK0 252 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 TRMT61BQ9BVS5 477 aaKnown RBP12.94□□□□□ -0.34
GABPB1-206ENST00000543881 LMAN1LQ9HAT1 526 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 ZFP14Q9HCL3 533 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 SLC38A7Q9NVC3 462 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 CITO14578 2027 aa12.94□□□□□ -0.34
GABPB1-206ENST00000543881 CFAP47Q6ZTR5 3102 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 ARHGEF37A1IGU5 675 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 SLC26A4O43511 780 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 LRG1P02750 347 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 COL4A2P08572 1712 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 PLCG1P19174 1290 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 UBA7P41226 1012 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 SIM2Q14190 667 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-206ENST00000543881 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
GABPB1-206ENST00000543881 MCM6Q14566 821 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 KARSQ15046 597 aaKnown RBP12.93□□□□□ -0.34
GABPB1-206ENST00000543881 FAM78AQ5JUQ0 283 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 PRSS36Q5K4E3 855 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 PRR23CQ6ZRP0 262 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 ANKS3Q6ZW76 656 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 HAUS6Q7Z4H7 955 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 GPBP1Q86WP2 473 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 KCNN1Q92952 543 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 IRF7Q92985 503 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 TCEAL4Q96EI5 215 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 LARSQ9P2J5 1176 aaKnown RBP12.93□□□□□ -0.34
GABPB1-206ENST00000543881 TUBGCP4Q9UGJ1 667 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 KCNG1Q9UIX4 513 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 TICRRQ7Z2Z1 1910 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 CHD8Q9HCK8 2581 aa12.93□□□□□ -0.34
GABPB1-206ENST00000543881 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-206ENST00000543881 PRRG1O14668 218 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ZNF197O14709 1029 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 CLDN3O15551 220 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 CXCL8P10145 99 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ELF1P32519 619 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 RPL9P32969 192 aaKnown RBP12.92□□□□□ -0.34
GABPB1-206ENST00000543881 LONP1P36776 959 aaKnown RBP12.92□□□□□ -0.34
GABPB1-206ENST00000543881 TNFSF9P41273 254 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 CXCL12P48061 93 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ZNF131P52739 623 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 SATB1Q01826 763 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ROR1Q01973 937 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 SPAG1Q07617 926 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 MRPL58Q14197 206 aaKnown RBP12.92□□□□□ -0.34
GABPB1-206ENST00000543881 CSRP2Q16527 193 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 SLC8B1Q6J4K2 584 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 USP49Q70CQ1 688 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 MAP4K3Q8IVH8 894 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ZNF461Q8TAF7 563 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ASB16Q96NS5 453 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 FIZ1Q96SL8 496 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ZNF334Q9HCZ1 680 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-206ENST00000543881 ODF2LQ9ULJ1 636 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 CLIC4Q9Y696 253 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 PIAS3Q9Y6X2 628 aa12.92□□□□□ -0.34
GABPB1-206ENST00000543881 PDCD11Q14690 1871 aaKnown RBP12.92□□□□□ -0.34
GABPB1-206ENST00000543881 TTC26A0AVF1 554 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 WDR27A2RRH5 827 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 VPS37CA5D8V6 355 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-206ENST00000543881 HRO43593 1189 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 FAM189A1O60320 539 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 GDF9O60383 454 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 ABLIM3O94929 683 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 CHRNB1P11230 501 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 PSMC3P17980 439 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 GDI1P31150 447 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 CCR2P41597 374 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 PTPAQ15257 358 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 FAM173BQ6P4H8 233 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 SLC39A4Q6P5W5 647 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 VITQ6UXI7 678 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-206ENST00000543881 MYCT1Q8N699 235 aa12.91□□□□□ -0.34
GABPB1-206ENST00000543881 RAD54LQ92698 747 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms